Job Description P30850 Confidence 92.29% Date Wed Jan 25 15:20:48 GMT 2012 Rank 80 Aligned Residues 58 % Identity 16% Template c2ba1B_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:archaeal exosome rna binding protein csl4; PDBTitle: archaeal exosome core Resolution 2.70 Å

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		557	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580										.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.
Query Sequence		K	A	G	T	D	T	R	F	A	A	E	I	V	D	I	S	R	G	G	M	R	V	R	L	.	.	.	.	.	.	.	.	.	V	D	N	G	A	I	A	F	I	P	A	P	F	L	H	A	V	R	D	E	L	V	C	S	Q	E	N	G	T	V	Q	I	K	G	E	T	V	Y	K	V	T	D	V	I	D	V	T
Query Conservation																										.	.	.	.	.	.	.	.	.
Alig confidence						.	.																			.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.																																															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	K	G	D	.	.	V	V	L	G	R	V	V	D	L	R	N	S	I	A	L	I	E	V	S	S	K	K	G	E	N	R	G	P	S	N	R	G	I	G	I	L	H	V	S	N	V	D	E	G	Y	V	.	.	.	.	.	.	.	.	.	.	.	.	K	E	I	S	E	A	V	G	Y	L	D	I	L	K	A	R
Template Known Secondary structure			T	T		.	.											T	T										T	T		S	S			S	S								T	T	S	S	S	S	S			.	.	.	.	.	.	.	.	.	.	.	.		S	S	T	T	T			S	S
Template Predicted Secondary structure						.	.																																															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		56	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.													.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		628
Predicted Secondary structure
Query SS confidence
Query Sequence		I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		122

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions