Job Description P30850 Confidence 96.10% Date Wed Jan 25 15:20:48 GMT 2012 Rank 63 Aligned Residues 69 % Identity 17% Template c2ba0A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:archeal exosome rna binding protein rrp4; PDBTitle: archaeal exosome core Resolution 2.70 Å

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		557	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	G	T	D	T	R	F	A	A	E	I	V	D	I	S	R	G	G	M	R	V	R	L	V	D	N	G	A	I	A	F	I	P	A	P	F	L	H	A	V	R	D	E	L	V	C	S	Q	E	N	G	T	V	Q	I	K	G	E	T	V	Y	K	V	T	D	V	I	D	V	T	I	A	E	V	R	M	E	T	R
Query Conservation
Alig confidence							.	.																		.																				.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation							.	.																		.																				.	.	.	.	.	.	.	.	.	.	.																								.
Template Sequence		S	V	G	D	V	.	.	V	I	G	I	I	R	E	V	A	A	N	G	W	A	V	D	I	.	Y	S	P	Y	Q	A	F	L	P	V	S	E	N	P	E	M	K	P	N	.	.	.	.	.	.	.	.	.	.	.	K	K	P	N	E	V	L	D	I	G	D	A	I	I	A	K	V	L	N	I	D	P	K	.	M
Template Known Secondary structure			T	T			.	.										S	S							.	S	S	S	S						G	G	G		T	T			T	T	.	.	.	.	.	.	.	.	.	.	.	S		G	G	G	T			T	T												T	T	.
Template Predicted Secondary structure							.	.																		.																				.	.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
		56	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.												.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120
		637	.	.	640
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	T	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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