Job Description P30850 Confidence 97.64% Date Wed Jan 25 15:20:48 GMT 2012 Rank 44 Aligned Residues 88 % Identity 18% Template c1l2fA_ PDB info PDB header:transcription Chain: A: PDB Molecule:n utilization substance protein a; PDBTitle: crystal structure of nusa from thermotoga maritima: a2 structure-based role of the n-terminal domain Resolution 2.50 Å

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		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	E	R	R	R	L	N	R	M	A	E	R	D	V	G	D	W	L	Y	A	R	F	L	K	D	K	A	G	T	D	T	R	F	A	A	E	I	V	D	I	S	R	G	G	M	R	V	R	L	V	D	N	G	A	I	A	F	I	P	A	P	F	L	H	A	V	R	D	E	L	V	C	S	Q	E	N	G	T	V
Query Conservation
Alig confidence																																.	.																				.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.																				.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	Q	T	A	K	Q	V	L	I	Q	R	I	R	E	L	E	K	E	K	Q	F	E	K	Y	S	E	L	K	G	T	.	.	V	T	T	A	E	V	I	R	V	X	G	E	W	A	D	I	R	I	G	.	.	K	L	E	T	R	L	P	K	K	E	W	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																											T	T	T	T	S	.	.											S	S							T	.	.	T							G	G	G	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.																				.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.
		611	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.			.	.	.	640
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		Q	I	K	G	E	T	V	Y	K	V	T	D	V	I	D	V	T	I	A	E	V	R	M	E	T	R	.	.	S	I	I	A
Query Conservation																												.	.
Alig confidence		.	.	.																								.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	P	G	E	E	I	K	A	G	D	L	V	K	V	Y	I	I	D	V	V	K	T	T	K	G	P	K	I	L	V
Template Known Secondary structure		.	.	.	T	T					T	T														T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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