Job Description P30850 Confidence 98.29% Date Wed Jan 25 15:20:48 GMT 2012 Rank 24 Aligned Residues 77 % Identity 16% Template c1go3E_ PDB info PDB header:transferase Chain: E: PDB Molecule:dna-directed rna polymerase subunit e; PDBTitle: structure of an archeal homolog of the eukaryotic rna2 polymerase ii rpb4/rpb7 complex Resolution 1.75 Å

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		557	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	G	T	D	T	R	F	A	A	E	I	V	D	I	S	R	G	G	M	R	V	R	L	V	D	N	G	A	I	A	F	I	P	A	P	F	L	H	A	V	R	D	E	L	V	C	S	Q	E	N	G	T	V	Q	I	K	G	E	T	V	Y	K	V	T	D	V	I	D	V	T	I	A	E	V	R	M	E	T	R
Query Conservation
Alig confidence							.	.																		.	.																				.	.	.
Template Conservation							.	.																		.	.																				.	.	.
Template Sequence		E	M	Y	E	L	.	.	I	E	G	E	V	V	D	V	V	E	F	G	S	F	V	R	L	.	.	G	P	L	D	G	L	I	H	V	S	Q	I	M	D	D	Y	V	S	Y	.	.	.	D	P	K	A	I	I	G	K	E	T	G	K	V	L	E	I	G	D	Y	V	R	A	R	I	V	A	I	S	L	K	A	S
Template Known Secondary structure			T	T			.	.										T	T							.	.	S	S	S						G	G	G	S		S	S					.	.	.								T	T	T						T	T
Template Predicted Secondary structure							.	.																		.	.																				.	.	.
Template SS confidence
		80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		637	.	.	640
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	A	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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