Job Description P46482 Confidence 99.89% Date Thu Jan 5 12:04:17 GMT 2012 Rank 6 Aligned Residues 225 % Identity 19% Template c3h9iB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:cation efflux system protein cusb; PDBTitle: crystal structure of the membrane fusion protein cusb from escherichia2 coli Resolution 3.40 Å

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		37	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure										.	.	.																			.
Query SS confidence										.	.	.																			.
Query Sequence		W	T	R	D	A	R	F	S	.	.	.	A	D	V	V	A	I	A	P	D	V	S	G	L	I	T	Q	V	N	.	V	H	D	N	Q	L	V	K	K	G	Q	I	L	F	T	I	D	Q	P	R	Y	Q	K	A	L	E	E	A	Q	A	D	V	A	Y	Y	Q	V	L	A	Q	E	K	R	Q	E	A	G	R	R	N
Query Conservation										.	.	.																			.
Alig confidence										.	.	.																			.																			.	.	.	.
Template Conservation																																																		.	.	.	.
Template Sequence		Q	S	F	P	A	N	V	S	Y	N	E	Y	Q	Y	A	I	V	Q	A	R	A	A	G	F	I	D	K	V	Y	P	L	T	V	G	D	K	V	Q	K	G	T	P	L	L	D	L	T	I	.	.	.	.	P	D	W	V	E	A	Q	S	E	Y	L	L	L	R	E	T	G	G	T	A	T	Q	T	E	G	I	L	E
Template Known Secondary structure										B		T	T									S									S			S	S					T	T									.	.	.	.																S
Template Predicted Secondary structure																																																		.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.					.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	G	V	Q	A	M	S	R	E	E	I	D	Q	A	N	N	V	L	Q	T	V	L	H	Q	L	A	K	A	Q	A	T	R	D	L	A	K	L	D	L	E	R	T	V	I	R	A	P	A	D	G	W	V	T	N	L	N	V	Y	T	G	E	F	I	T	R	G	S	T	A	V	A	L	V	K	Q	N	S	F	Y
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	R	L	A	G	M	P	E	A	D	I	R	R	L	I	A	T	Q	K	I	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	F	T	L	K	A	P	I	D	G	V	I	T	A	F	D	L	R	A	G	M	N	I	A	K	D	N	V	V	A	K	I	Q	G	M	D	P	V	W
Template Known Secondary structure							T																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	S					S						S	S					S											S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.																			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		V	L	A	Y	M	E	E	T	K	L	E	G	V	R	P	G	Y	R	A	E	I	T	P	L	G	.	S	N	K	V	L	K	G	T	V	D	S	V	A	A	G	V	T	N	A	S	S	T	R	D	D	K	G	M	A	T	I	D	S	N	L	E	W	V	R	L	A	Q	R	V	P	V	R	I	R	L	D	N	Q	Q
Query Conservation																											.
Alig confidence																											.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Sequence		V	T	A	A	I	P	E	S	I	A	W	L	V	K	D	A	S	Q	F	T	L	T	V	P	A	R	P	D	K	T	L	T	I	R	K	W	T	L	L	P	G	V	D	A	A	T	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	L	R	L	E	V	.	D	N	A
Template Known Secondary structure																	G	G	G						S	S				S															T	T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.																						.	.	.	.	.	.	300		.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	I	W	P	A	G	T	T	A	T	V	V	V	T	G	K	Q	D	R	D	E	S	Q	D	S	F	F	R	K	M	A	H	R	L	R	E	F	G
Query Conservation
Alig confidence																						.	.	.	.	.
Template Conservation																						.	.	.	.	.
Template Sequence		D	E	A	L	K	P	G	M	N	A	W	L	Q	L	N	T	A	S	E	P	.	.	.	.	.	M	L	L	I	P	S	Q	A	L	I	D	T	G	S
Template Known Secondary structure		S	S				T	T												S		.	.	.	.	.						G	G	G		B		S	S	S
Template Predicted Secondary structure																						.	.	.	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.						.	.	.	.	.	.	330	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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