Job Description P46482 Confidence 99.94% Date Thu Jan 5 12:04:17 GMT 2012 Rank 4 Aligned Residues 216 % Identity 19% Template c1t5eB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:multidrug resistance protein mexa; PDBTitle: the structure of mexa Resolution 3.00 Å

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		37	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		W	T	R	D	A	R	F	S	A	.	D	V	V	A	I	A	P	D	V	S	G	L	I	T	Q	V	N	V	H	D	N	Q	L	V	K	K	G	Q	I	L	F	T	I	D	Q	P	R	Y	Q	K	A	L	E	E	A	Q	A	D	V	A	Y	Y	Q	V	L	A	Q	E	K	R	Q	E	A	G	R	R	N	R	L	G
Query Conservation											.
Alig confidence											.																																																													.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		T	E	L	P	G	R	T	N	A	F	R	I	A	E	V	R	P	Q	V	N	G	I	I	L	K	R	L	F	K	E	G	S	D	V	K	A	G	Q	Q	L	Y	Q	I	D	P	A	T	Y	E	A	D	Y	Q	S	A	Q	A	N	L	A	S	T	Q	E	Q	A	Q	R	Y	K	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											S								S	S									S		T	T					T	T																																		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	A	M	S	R	E	E	I	D	Q	A	N	N	V	L	Q	T	V	L	H	Q	L	A	K	A	Q	A	T	R	D	L	A	K	L	D	L	E	R	T	V	I	R	A	P	A	D	G	W	V	T	N	L	N	V	Y	T	G	E	F	I	T	R	G	S	T	A	V	A	L	V	K	Q	N	S	F	Y	V	L	A
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	L	L	V	A	D	Q	A	V	S	K	Q	Q	Y	A	D	A	N	A	A	Y	L	Q	S	K	A	A	V	E	Q	A	R	I	N	L	R	Y	T	K	V	L	S	P	I	S	G	R	I	G	R	S	A	V	T	E	G	A	L	V	T	N	G	Q	A	N	A	M	A	T	V	Q	Q	L	D	P	I	Y	V	D	V
Template Known Secondary structure		.					T			S																												T	T					S	S	S							S	S		T	T					T	T		S	S		S							S	S
Template Predicted Secondary structure		.
Template SS confidence
			99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.														.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query Sequence		Y	M	E	E	T	K	L	E	G	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	Y	R	A	E	I	T	P	L	G	.	S	N	K	V	L	K	G	T	V	D	S	V	A	A	G	V	T	N	A	S	S	T	R	D	D	K	G	M	A	T	I	D	S	N	L	E	W	V	R	L	A	Q	R	V
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.												.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.												.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	Q	P	S	T	A	L	L	R	L	R	R	E	L	A	S	G	Q	L	E	R	A	G	D	N	A	A	K	V	S	L	K	L	E	D	G	S	Q	Y	P	L	E	G	R	L	E	F	S	E	V	S	V	D	E	G	T	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V
Template Known Secondary structure																	T	T		S					T	T									T	T	S												S						T	T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.																						.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	R	I	R	L	D	N	Q	Q	E	N	I	W	P	A	G	T	T	A	T	V	V	V
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		T	I	R	A	V	F	.	P	N	P	N	N	E	L	L	P	G	M	F	V	H	A	Q	L
Template Known Secondary structure								.			G	G	G				T	T
Template Predicted Secondary structure								.
Template SS confidence
		237	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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