Return to main results Retrieve Phyre Job Id

Job DescriptionP69874
Confidence97.93%DateThu Jan 5 12:12:15 GMT 2012
Rank114Aligned Residues155
% Identity15%Templated1v5wa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60........ .70.........80.........90.........100.........110...
Predicted Secondary structure 













......























Query SS confidence 




























. . . . . .












































Query Sequence  INNGEFLTLLGPSGCGKTTVLRLIAGLET. . . . . . VDSGRIMLDNEDITHVPAENRYVNTVFQSYALFPHMTVFENVAFG
Query Conservation 
  


  


 








  
 

  ......
  
 
   
            
  
     
    

  

   
Alig confidence 




























......






















......................
Template Conservation 
  
    
 
  




 
  
                 
  
  
       
   ......................
Template Sequence  IESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDI. . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  B
SS

TT
TTTS
BTTTB


SSS


......................
Template Predicted Secondary structure 
























......................
Template SS confidence 















































































   116...120.........130.........140.........150.........160.........170...
 
   114.....120.........130.........140.........150.........160.........170.. .......180.
Predicted Secondary structure 





























............






Query SS confidence 


























































. . . . . . . . . . . .








Query Sequence  LRMQKTPAAEITPRVMEALRMVQLETFAQRKPHQLSGGQQQRVAIARAVVNKPRLLLLD. . . . . . . . . . . . ESLSALDYK
Query Conservation                    
    
          



  


 




   
 




............

 
 

  
Alig confidence  .........

















































............








Template Conservation  .........                                               


 
                   
Template Sequence  . . . . . . . . . ADRFNVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQ
Template Known Secondary structure  .........TT

T

STTS
SSTSGGG

GGG
Template Predicted Secondary structure  .........
























Template SS confidence 















































































   174.....180.........190.........200.........210.........220.........230.........240....
 
   182.......190.........200.........210.........220.....
Predicted Secondary structure 









Query SS confidence 











































Query Sequence  LRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGR
Query Conservation      
   
  
    
 


 



  
    



 

  

Alig confidence 











































Template Conservation   
      
  

    
 
              
 

 
    
Template Sequence  KLAQMLSRLQKISEEYNVAVFVTNQMGHILAHASTTRISLRKGR
Template Known Secondary structure  T




TTTTSSSSS
Template Predicted Secondary structure 














Template SS confidence 











































   245....250.........260.........270.........280........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions