Return to main results Retrieve Phyre Job Id

Job DescriptionP69874
Confidence97.85%DateThu Jan 5 12:12:15 GMT 2012
Rank121Aligned Residues153
% Identity15%Templated1szpa2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
Resolution3.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60.... .....70.........80.........90.........100.........110...
Predicted Secondary structure 









......



























Query SS confidence 
























. . . . . .
















































Query Sequence  INNGEFLTLLGPSGCGKTTVLRLIA. . . . . . GLETVDSGRIMLDNEDITHVPAENRYVNTVFQSYALFPHMTVFENVAFG
Query Conservation 
  


  


 








  
 ......

  
  
 
   
            
  
     
    

  

   
Alig confidence 
























......











.................................



Template Conservation 
  
 
  
 
  
 


 
 
  
               
  .................................
  
Template Sequence  VETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IDTE
Template Known Secondary structure  SSSSTTSSTTTTTS
TTTT

S
.................................SS
Template Predicted Secondary structure 


















.................................

Template SS confidence 















































































   175....180.........190.........200.........210....... ..220.
 
   114.....120.........130.........140.........150.........160.........170.. ....... 180......
Predicted Secondary structure 





























..






.....
Query SS confidence 


























































. .






. . . . .






Query Sequence  LRMQKTPAAEITPRVMEALRMVQLETFAQRKPHQLSGGQQQRVAIARAVVNKPRLLLLD. . ESLSALD. . . . . YKLRKQM
Query Conservation                    
    
          



  


 




   
 




..

 
 

.....      
Alig confidence 


























































..






.....






Template Conservation                                                         





  
            
   
Template Sequence  GTFRPVRLVSIAQRFGLDPDDALNNVAYARAYNADHQLRLLDAAAQMMSESRFSLIVVDSVMALYRTDELSARQMHLAKF
Template Known Secondary structure  S


GGGGT


GGG

STTTTS
TGGGGGS


T
Template Predicted Secondary structure 


























Template SS confidence 















































































   222.......230.........240.........250.........260.........270.........280.........290.........300.
 
   187..190.........200........ .210.........220.....
Predicted Secondary structure 



...





Query SS confidence 





















. . .
















Query Sequence  QNELKALQRKLGITFVFVTHDQ. . . EEALTMSDRIVVMRDGR
Query Conservation     
  
    
 


 



 ... 
    



 

  

Alig confidence 





















...
















Template Conservation     
   
      

                   
 
    
Template Sequence  MRALQRLADQFGVAVVVTNQVVTGGNIMAHSSTTRLGFKKGK
Template Known Secondary structure 






S
S
Template Predicted Secondary structure 














Template SS confidence 









































   307..310.........320.........330.........340........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions