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Job DescriptionP69874
Confidence100.00%DateThu Jan 5 12:12:15 GMT 2012
Rank34Aligned Residues232
% Identity27%Templatec3nhaA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:atp-binding cassette sub-family b member 6, mitochondrial; PDBTitle: nucleotide binding domain of human abcb6 (adp mg bound structure)
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  QSKKLNKQPSSLSPLVQLAGIRKCFDGKEVIPQLDLTINNGEFLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLDNEDIT
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Template Sequence  KDLPGAGPLRFQKGRIEFENVHFSYADRETLQDVSFTVMPGQTLALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDIS
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   575....580.........590.........600.........610.........620.........630.........640.........650....
 
   83..... .90.........100.........110.........120.........130..... ....140.........150.....
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Query Sequence  HVPAEN. . RYVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMV. . . . . QLETFAQRKPHQLSGGQQQR
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Template Sequence  QVTQASLRSHIGVVPQDTVLF. NDTIADNIRYGRVTAGNDEVEAAAQAAGIHDAIMAFPEGYRTQVGERGLKLSGGEKQR
Template Known Secondary structure  GS
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   656...660.........670...... ...680.........690.........700.........710.........720.........730....
 
   156...160.........170.........180.........190.........200.........210.........220.........230.....
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Query Sequence  VAIARAVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREI
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Template Sequence  VAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCA. . NRTTIVVAHRLSTVV. NADQILVIKDGCIVERGRHEAL
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   735....740.........750.........760.........770.... .....780......... 790.........800.........810.
 
   236..
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Query Sequence  YEE
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Template Sequence  LSR
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   812..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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