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Job DescriptionP69874
Confidence100.00%DateThu Jan 5 12:12:15 GMT 2012
Rank51Aligned Residues218
% Identity27%Templatec3bk7A_
PDB info PDB header:hydrolyase/translationChain: A: PDB Molecule:abc transporter atp-binding protein; PDBTitle: structure of the complete abce1/rnaase-l inhibitor protein2 from pyrococcus abysii
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  SKKLNKQPSSLSPLVQLAGIRKCFDGKEVIPQLDLTINNGEFLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLDNEDITH
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Template Sequence  TKLSERVDVERETLVEYPRLVKDYGSFK. LEVEPGEIRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEWDLT. . . .
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   330.........340.........350....... ..360.........370.........380.........390.........400....
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  VPAENRYVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLETFAQRKPHQLSGGQQQRVAIARAVV
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Template Sequence  . . . . . . . VAYKPQYIKAEYEGTVYELLS. . . . KIDSSKLNSNFYKTELLKPLGIIDLYDRNVEDLSGGELQRVAIAATLL
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   405....410.........420..... ....430.........440.........450.........460.........470...
 
   164.....170.........180.........190.........200.........210.........220.. .......230.......
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Query Sequence  NKPRLLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMR. . DGRIEQDGTPREIYE
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Template Sequence  RDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLIVFEGEPGRHGRALPPMGMRE
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   474.....480.........490.........500.........510.........520.........530.........540.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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