Job Description P69874 Confidence 96.29% Date Thu Jan 5 12:12:15 GMT 2012 Rank 317 Aligned Residues 157 % Identity 15% Template c2iutA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:dna translocase ftsk; PDBTitle: p. aeruginosa ftsk motor domain, dimeric Resolution 2.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		P	Q	L	D	L	T	I	N	N	G	E	F	L	T	L	L	G	P	S	G	C	G	K	T	T	V	L	R	L	I	A	.	.	G	L	E	T	V	D	S	G	R	I	M	L	D	N	E	D	I	T	H	V	P	A	E	N	R	Y	V	N	T	V	F	Q	S	Y	A	L	F	P	H	M	T	V	F	E	N	V	A
Query Conservation																																	.	.
Alig confidence																																	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	P	I	I	T	D	L	A	K	M	P	H	L	L	V	A	G	T	T	G	S	G	K	S	V	G	V	N	A	M	L	L	S	I	L	F	K	S	T	P	S	E	A	R	L	I	M	I	D	P	K	M	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	I	Y	E	G	I	P
Template Known Secondary structure								G	G	G	S									T	T	S	S														T	T			T	T	T								S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T	T		T
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.																			.	.	.	.	.	.	510	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.																						.	.	.	.	.
Predicted Secondary structure																												.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	G	L	R	M	Q	K	T	P	A	A	E	I	T	P	R	V	M	E	A	L	R	M	V	Q	L	.	.	E	T	F	A	Q	R	K	P	H	Q	L	S	G	G	Q	Q	Q	R	V	A	I	A	R	A	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	P	R	L
Query Conservation																												.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	L	L	C	P	V	V	T	D	M	K	E	A	A	N	A	L	R	W	S	V	A	E	M	E	R	R	Y	R	L	M	A	A	M	G	V	R	N	L	A	G	F	N	R	K	V	K	D	A	E	E	A	G	T	P	L	T	D	P	L	F	R	R	E	S	P	D	D	E	P	P	Q	L	S	T	L	P	T	I	V
Template Known Secondary structure		T	B	S	S	S		B																												T		S	S														T	T				B		T	T					S	T	T					B
Template Predicted Secondary structure
Template SS confidence
		512	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		L	L	L	D	E	S	L	S	A	L	D	Y	K	L	R	K	Q	M	Q	N	E	L	K	A	L	.	.	.	Q	R	K	L	G	I	T	F	V	F	V	T	H	D	Q	E
Query Conservation																											.	.	.
Alig confidence							.																				.	.	.
Template Conservation							.
Template Sequence		V	V	V	D	E	.	F	A	D	M	M	M	I	V	G	K	K	V	E	E	L	I	A	R	I	A	Q	K	A	R	A	A	G	I	H	L	I	L	A	T	Q	R	P	S
Template Known Secondary structure					S		.		T	T					T																T	T	T	T								S
Template Predicted Secondary structure							.
Template SS confidence
		592	.	.	.	.		.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions