 |
Job Description | P69874 | Confidence | 95.90% | Date | Thu Jan 5 12:12:15 GMT 2012 |
Rank | 359 | Aligned Residues | 37 |
% Identity | 24% | Template | c1xzqA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:probable trna modification gtpase trme; |
PDBTitle: structure of the gtp-binding protein trme from thermotoga2 maritima complexed with 5-formyl-thf
|
Resolution | 2.90 Å |
|
  |   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | L | L | G | P | S | G | C | G | K | T | T | V | L | R | L | I | A | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | E | T | V | D | S | G | R | I | M | L | D | N | E | D | I | T |
Query Conservation |   |
  |   |
|
|
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |
| . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |
|   |
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |
|
|
|
|   |   |   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |
|   |   |
|   |
Template Sequence |   |
M | V | I | V | G | K | P | N | V | G | K | S | T | L | L | N | R | L | L | N | E | D | R | A | I | V | T | D | I | P | G | T | T | R | D | V | I | S | E | E | I | V | I | R | G | I | L | F | R |
Template Known Secondary structure |   |
 |  |  |  |
|
| T | T | G | G | G | S |  |  |  |  |  |  |  |  |  | T | B |
|
|
|
|
|
|
|
|
| S |
|
| S |
|
|  |  |  |  |  | T | T |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
214 | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|