Return to main results Retrieve Phyre Job Id

Job DescriptionP06988
Confidence98.73%DateThu Jan 5 10:59:46 GMT 2012
Rank13Aligned Residues337
% Identity18%Templated1ag8a_
SCOP infoALDH-like ALDH-like ALDH-like
Resolution2.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40... ......50.........60.........70.........80.......
Predicted Secondary structure 









.







Query SS confidence 


































.











































Query Sequence  WNSCTAEQQRQLLMRPAISASESITRTVNDILDNV. KARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQA
Query Conservation     
        
 
        
   
  

  
.
  

 

  

 



     
 

  

  
   
      
Alig confidence 


































.









..................................
Template Conservation 
       
   
   
  
      

     
 

    
   
..................................
Template Sequence  WRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S
T
S
T..................................
Template Predicted Secondary structure 






..................................
Template SS confidence 















































































   76...80.........90.........100.........110.........120.
 
   88.90.........100......... 110.........120.........130......... 140.........150.........160.. .
Predicted Secondary structure 



.











.





..
Query SS confidence 





















.





























.






















. .
Query Sequence  MAVAVKNIETFHTAQKLPPVDV. ETQPGVRCQQVTRPVASVGLYIPGGSAPLF. STVLMLATPASIAGCKKVVLCSP. . P
Query Conservation 
  
  

  

  
       .    

  

   

 


 




 
 

.




  







  

  

..
Alig confidence 





















.






















...



.






















..
Template Conservation 
      
                            
 


  
 
... 
 
          





 





    
Template Sequence  LDMVLKCLRYYAGWADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIP. . . WNFPLLMQAWKLGPALATGNVVVMKVAEQTP
Template Known Secondary structure  TTTTT





SSS



...SSST

TTS
Template Predicted Secondary structure 















...











Template SS confidence 















































































   122.......130.........140.........150.........160....... ..170.........180.........190........
 
   164.....170.........180 .........190.........200.........210.........220.........230.........
Predicted Secondary structure 




....






























Query SS confidence 
















. . . .


























































Query Sequence  PIADEILYAAQLCGVQD. . . . VFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAAIDMPAGPSEV
Query Conservation   
 
 

 

 
 

  ....

 



























 

  

  
 
 
   


  





Alig confidence 
















....














....
























.













Template Conservation       
 
 
 




 
 
  
          
  ....   
  
 



   
  
   
  .    
   
 

  
Template Sequence  LTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIAS. . . . HEDVDKVAFTGSTEVGHLIQVAAGK. SNLKRVTLEIGGKS
Template Known Secondary structure  T

TTSB
T....
TT

S
.TT






Template Predicted Secondary structure 







....











.









Template SS confidence 















































































   199200.........210.........220.........230.... .....240.........250......... 260.........270...
 
   240.........250.........260... ......270.........280.........290....
Predicted Secondary structure 






....







.....................
Query SS confidence 























. . . .






























. . . . . . . . . . . . . . . . . . . . .
Query Sequence  LVIADSGATPDFVASDLLSQAEHG. . . . PDSQVILLTPAADMARRVAEAVERQLAELPR. . . . . . . . . . . . . . . . . . . . .
Query Conservation 




  
 
  










 ....
 
 




 
  

  
  

  

  
 
.....................
Alig confidence 























....









.



















.....................
Template Conservation    

  


   

  

       

 
 
   


 .    
 
   
      
  
 
       


        
Template Sequence  PNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQ. EDIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKK
Template Known Secondary structure 
TTS
GGGG

TT


.

B

TTSTT
SB


SS
Template Predicted Secondary structure 














.


















Template SS confidence 















































































   274.....280.........290.........300.........310. ........320.........330.........340.........350..
 
   295....300.........310 .........320....... ..330.
Predicted Secondary structure  .


.........................................



.
Query SS confidence  .















. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
















.



Query Sequence  . AETARQALNASRLIVT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KDLAQCVEISNQYGPEH. LIIQ
Query Conservation  .  
   

  
 

 
.........................................  
 

    
  



.


 
Alig confidence  .















.........................................
















.



Template Conservation      
  
   

  
         
    



           

 




 
       


   
    

 
 
 
Template Sequence  VLGYIKSGKEEGLKLLCGGGAAADRGYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVF
Template Known Secondary structure  T


SBS
SSS

B

S

TTSS


SS


SS

S
Template Predicted Secondary structure 
































Template SS confidence 















































































   353......360.........370.........380.........390.........400.........410.........420.........430..
 
   332... ....340.........350.........360.........370.........380.........390...
Predicted Secondary structure 

...

































Query SS confidence 



. . .

























































Query Sequence  TRNA. . . RELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTVQ
Query Conservation     
...   
  
 







  

 
 


 








 
 

  




  
 
  
  
Alig confidence 



...






.




















....
























Template Conservation 
 
          
.  
 
 

         



....   

 
   
   
  
   
 
 
Template Sequence  TKDLDKANYLSQAL. QAGTVWVNCYDVFGAQSPFGG. . . . YKLSGSGRELGEYGLQAYTEVKTVT
Template Known Secondary structure 
S
S.

SS
SS


TTS



....SSTTS

STTTT
Template Predicted Secondary structure 


.
















....












Template SS confidence 
































































   433......440...... ...450.........460....... ..470.........480.........490..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions