Job Description P06988 Confidence 98.70% Date Thu Jan 5 10:59:46 GMT 2012 Rank 15 Aligned Residues 343 % Identity 14% Template c3rosA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nad-dependent aldehyde dehydrogenase; PDBTitle: crystal structure of nad-dependent aldehyde dehydrogenase from2 lactobacillus acidophilus Resolution 1.88 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	N	S	C	T	A	E	Q	Q	R	Q	L	L	M	R	P	A	I	S	A	S	E	S	I	T	R	T	V	N	D	I	L	D	N	V	K	A	R	G	D	E	A	L	R	E	Y	S	A	K	F	D	K	T	T	V	T	A	L	K	V	S	A	E	E	I	A	A	A	S	E	R	L	S	D	E	L	K	Q	A	M
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	R	H	E	E	P	A	S	R	A	E	I	L	H	D	I	A	N	A	L	K	E	H	E	D	E	L	A	K	X	X	T	L	E	X	G	K	L	L	S	E	S	K	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V
Template Known Secondary structure			T	T	S		T																	T																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.																																			.
		89	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.
Predicted Secondary structure														.																																													.																			.	.
Query SS confidence														.																																													.																			.	.
Query Sequence		A	V	A	V	K	N	I	E	T	F	H	T	.	A	Q	K	L	P	P	V	D	V	E	T	Q	P	G	V	R	C	Q	Q	V	T	R	P	V	A	S	V	G	L	Y	I	P	G	G	S	A	P	L	F	S	T	V	L	M	.	L	A	T	P	A	S	I	A	G	C	K	K	V	V	L	C	S	P	.	.	P	P
Query Conservation														.																																													.																			.	.
Alig confidence														.																																	.	.	.										.																			.	.
Template Conservation																																															.	.	.
Template Sequence		E	L	C	V	S	I	C	N	Y	Y	A	D	H	G	P	E	X	L	K	P	T	K	L	N	S	D	L	G	N	A	Y	Y	L	K	Q	S	T	G	V	I	X	A	C	E	P	.	.	.	W	N	F	P	L	Y	Q	V	I	R	V	F	A	P	N	F	I	V	G	N	P	I	L	L	K	H	A	H	N	V	P	G
Template Known Secondary structure																			T	S							T	T	S																		.	.	.	S	S	S	T	T														T									T	T
Template Predicted Secondary structure																																															.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130				.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		I	A	D	E	I	L	Y	A	A	Q	L	C	G	V	Q	D	.	.	.	V	F	N	V	G	G	A	Q	A	I	A	A	L	A	F	G	T	E	S	V	P	K	V	D	K	I	F	G	P	G	N	A	F	V	T	E	A	K	R	Q	V	S	Q	R	L	D	G	A	A	I	D	M	P	A	G	P	S	E	V	L	V
Query Conservation																		.	.	.
Alig confidence																		.	.	.																.	.	.	.
Template Conservation																																				.	.	.	.
Template Sequence		S	A	A	L	T	A	K	I	I	K	R	A	G	A	P	E	G	S	L	I	N	L	Y	P	S	Y	D	Q	L	A	D	I	I	A	.	.	.	.	D	P	R	I	Q	G	V	A	L	T	G	S	E	R	G	G	S	A	V	A	E	A	A	G	K	N	L	K	K	S	T	X	E	L	G	G	N	D	A	F	I	V
Template Known Secondary structure														T			T	T	S																T	.	.	.	.	S	T	T								S															T	T
Template Predicted Secondary structure																																				.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.					.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.				270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.																							.	.
Predicted Secondary structure																														.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	D	S	G	A	T	P	D	F	V	A	S	D	L	L	S	Q	A	E	H	G	P	D	S	Q	V	I	.	.	.	L	L	T	P	A	A	D	M	A	R	R	V	A	E	A	V	E	R	Q	L	A	E	L	P	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E
Query Conservation																														.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																											.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	L	D	D	A	D	P	Q	V	L	R	N	V	L	N	D	A	R	T	Y	N	D	G	Q	V	C	T	S	S	K	R	I	I	V	E	K	S	R	Y	D	E	V	L	H	E	L	K	N	V	F	S	N	L	K	A	G	D	P	L	E	A	D	T	T	L	P	P	X	N	S	E	K	A	K	E	K	L	E	A
Template Known Secondary structure		.	.		T	T											T	T	T	T	T	G	G	G	G			T	T	S								G	G	G														T			B	S		T	T	S	T	T			B				S
Template Predicted Secondary structure		.	.
Template SS confidence
				239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		297	.	.	300	.	.	.	.	.																																										.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query Sequence		T	A	R	Q	A	L	N	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	I	V	T	K	D	L	A	Q	C	V	E	I	S	N	Q	Y	G	P	E	H	.	L	I	I	Q	T	R	N
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		Q	V	K	E	A	I	D	A	G	A	K	V	F	Y	Q	Y	P	E	I	D	S	K	G	A	F	F	R	P	T	I	L	T	D	I	A	K	D	N	P	V	F	D	K	E	V	F	G	P	I	A	E	V	F	V	V	E	D	D	N	A	A	I	Q	L	A	N	D	S	S	Y	G	L	G	S	S	V	I	G	S	D
Template Known Secondary structure									T	T													S	S													T	T	S	T	T	T	T	S				S	S								S	S										S	S	S			S							S
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		335	.	.	.	.	340	.	.	.	.			.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		A	R	E	L	V	D	S	I	T	S	.	.	A	G	S	V	F	L	G	D	W	S	P	E	S	A	G	D	Y	A	S	G	T	N	H	V	L	P	T	Y	G	Y	T	A	T	C	S	S	L	G	L	A	D	F	Q	K	R	M	T	V	Q	E	L	S	K	E
Query Conservation												.	.
Alig confidence												.	.																								.	.	.	.
Template Conservation																																					.	.	.	.
Template Sequence		I	D	R	A	K	K	V	S	A	Q	I	E	T	G	X	T	V	I	N	G	R	W	I	T	S	G	E	L	P	F	G	G	I	K	K	.	.	.	.	S	G	Y	G	R	E	L	S	G	L	G	L	X	A	F	V	N	E	H	L	V	I	D	V	T	K	N
Template Known Secondary structure												S		S	S					T	S						T	T	S		B			S	G	G	.	.	.	.	G			S		B	S						T	T	T										G	G	G
Template Predicted Secondary structure																																					.	.	.	.
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.					.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.