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Job DescriptionP06988
Confidence98.35%DateThu Jan 5 10:59:46 GMT 2012
Rank30Aligned Residues330
% Identity16%Templatec3r64A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:nad dependent benzaldehyde dehydrogenase; PDBTitle: crystal structure of a nad-dependent benzaldehyde dehydrogenase from2 corynebacterium glutamicum
Resolution2.57 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
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Query Sequence  WNSCTAEQQRQLLMRPAISASESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQAM
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Template Sequence  WAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANLEI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TL
Template Known Secondary structure  S
TTS


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   66...70.........80.........90.........100.........110. ..
 
   8990.........100.........110.........120.........130.........140..... ....150.........160.......
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Query Sequence  AVAVKNIETFHTAQKLPPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLML. ATPASIAGCKKVVLCSPPPIAD
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Template Sequence  AGNITKESASFPGRVHGRISPSNTPGKENRVYRVAKGVVGVISP. . . WNFPLNLSIRSVAPALAVGNAVVIKPASDTPVT
Template Known Secondary structure  TTSTTT




SSTT
S

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   114.....120.........130.........140.........150....... ..160.........170.........180.........190
 
   168.170..... ....180.........190.........200.........210.........220.........230.........240
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Query Sequence  EILYAAQL. . . . . . . CGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAAIDMPAGPSEVL
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Template Sequence  GGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVT. . . . HAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAP
Template Known Secondary structure  TTTT

TTT



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   191........200.........210.........220..... ....230.........240.........250.........260......
 
   241........250.........260..... ....270.........280.........290.....
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Query Sequence  VIADSGATPDFVASDLLSQAEHGPD. . . . SQVILLTPAADMARRVAEAVERQLAELPRA. . . . . . . . . . . . . . . . . . . . .
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Template Sequence  FVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVD. AAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGL
Template Known Secondary structure 
TTS
TSTT
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S.T

BS
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   267..270.........280.........290.........300... ......310.........320.........330.........340.....
 
   296...300.........310 .........320....... ..330.....
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Query Sequence  . ETARQALNASRLIVT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KDLAQCVEISNQYGPEH. LIIQTRNA
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Template Sequence  KEKIELAKKEGATVQVEGPIEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDI
Template Known Secondary structure  TTT



TT


TTSGGGTS


SSSSTSSS

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   346...350.........360.........370.........380.........390.........400.........410.........420.....
 
   336...340.........350.........360.........370.........380..
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Query Sequence  . . . RELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATCSSLG
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Template Sequence  DRAAQFALQI. DSGMVHINDR. . . FNGDWAIEEFTTDRWIGIKRSAENLY
Template Known Secondary structure  TTS.
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   426...430..... ....440..... ....450.........460.........470.
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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