Job Description P06988 Confidence 24.66% Date Thu Jan 5 10:59:46 GMT 2012 Rank 71 Aligned Residues 127 % Identity 13% Template c3lehA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative hydroxymethylglutaryl-coa synthase; PDBTitle: the crystal structure of smu.943c from streptococcus mutans ua159 Resolution 1.70 Å

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.				.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		V	A	S	V	G	L	Y	I	P	G	G	S	A	P	L	F	S	T	V	L	M	L	A	T	P	A	S	I	.	.	.	A	G	C	K	K	V	V	L	C	S	P	P	P	I	A	D	E	I	L	Y	A	A	Q	L	C	G	V	Q	D	V	F	N	V	G	G	A	Q	A	I	A	A	L	A	F	G	T	E	S	V
Query Conservation																														.	.	.
Alig confidence																									.					.	.	.												.																				.	.	.
Template Conservation																									.																			.																				.	.	.
Template Sequence		I	D	K	I	G	F	T	S	S	Q	Y	V	L	N	M	K	D	L	A	E	A	R	G	.	E	Q	K	F	S	K	G	L	L	L	N	A	L	S	I	A	P	I	.	T	D	D	V	V	T	L	A	A	G	S	A	N	E	I	L	T	A	E	.	.	.	D	K	E	K	I	D	M	V	I	L	A	T	E	S	D
Template Known Secondary structure											S													T	.				T	T	T	T	T										T	.	T	S												T	T					.	.	.
Template Predicted Secondary structure																									.																			.																				.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	V	D	K	I	F	G	P	G	N	A	F	V	T	E	A	K	R	Q	V	S	Q	R	L	D	G	A	A	I	D	M	P	A	G	P	S	E	V	L	V	I	A	D	S	G	A	T	P	D	F	V	A	S	D	L	L	S	Q	A	E	H	G	P	D	S	Q	V	I	L	L	T	P	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.																				.	.								.	.	.	.	.	.	.																		.	.	.
Template Conservation		.	.	.	.	.	.	.																				.	.								.	.	.	.	.	.	.																		.	.	.
Template Sequence		.	.	.	.	.	.	.	S	K	A	G	A	V	Y	V	H	S	L	L	G	I	Q	P	F	A	R	.	.	S	F	E	M	K	E	A	.	.	.	.	.	.	.	C	Y	S	A	T	A	A	L	N	Y	A	K	L	H	V	E	K	.	.	.	H	P	D	T	R	V	L	V	L	A	S	D
Template Known Secondary structure		.	.	.	.	.	.	.												T	T			S	S			.	.						S	T	.	.	.	.	.	.	.	T	T																.	.	.	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.																				.	.								.	.	.	.	.	.	.																		.	.	.
Template SS confidence
									85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110								.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions