Job Description P06988 Confidence 98.95% Date Thu Jan 5 10:59:46 GMT 2012 Rank 5 Aligned Residues 337 % Identity 19% Template c3ek1C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:aldehyde dehydrogenase; PDBTitle: crystal structure of aldehyde dehydrogenase from brucella2 melitensis biovar abortus 2308 Resolution 2.10 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	N	S	C	T	A	E	Q	Q	R	Q	L	L	M	R	P	A	I	S	A	S	E	S	I	T	R	T	V	N	D	I	L	D	N	V	K	A	R	G	D	E	A	L	R	E	Y	S	A	K	F	D	K	T	T	V	T	A	L	K	V	S	A	E	E	I	A	A	A	S	E	R	L	S	D	E	L	K	Q	A	M
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	A	A	K	T	A	K	E	R	A	G	I	L	R	K	W	F	D	L	I	I	A	N	A	D	D	I	A	L	I	M	T	S	E	Q	G	K	P	L	A	E	A	R	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V
Template Known Secondary structure					S																			T																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.																																			110
		89	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.
Predicted Secondary structure												.	.																																										.																								.	.
Query SS confidence												.	.																																										.																								.	.
Query Sequence		A	V	A	V	K	N	I	E	T	F	.	.	H	T	A	Q	K	L	P	P	V	D	V	E	T	Q	P	G	V	R	C	Q	Q	V	T	R	P	V	A	S	V	G	L	Y	I	P	G	G	S	A	P	L	F	.	S	T	V	L	M	L	A	T	P	A	S	I	A	G	C	K	K	V	V	L	C	S	P	.	.	P
Query Conservation												.	.																																										.																								.	.
Alig confidence												.	.																																			.	.	.					.																								.	.
Template Conservation																																																.	.	.
Template Sequence		L	Y	A	A	S	F	I	E	W	F	A	E	E	A	K	R	V	Y	G	D	T	I	P	A	P	Q	N	G	Q	R	L	T	V	I	R	Q	P	V	G	V	T	A	A	I	T	P	.	.	.	W	N	F	P	A	A	M	I	T	R	K	A	A	P	A	L	A	A	G	C	T	M	I	V	R	P	A	D	L	T	P
Template Known Secondary structure																T	T									S	S	T	T																			.	.	.	S	S	S	T	T														T									T	T	S
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.							.	.	.
Query SS confidence																	.							.	.	.
Query Sequence		P	I	A	D	E	I	L	Y	A	A	Q	L	C	G	V	.	Q	D	V	F	N	V	.	.	.	G	G	A	Q	A	I	A	A	L	A	F	G	T	E	S	V	P	K	V	D	K	I	F	G	P	G	N	A	F	V	T	E	A	K	R	Q	V	S	Q	R	L	D	G	A	A	I	D	M	P	A	G	P	S	E	V
Query Conservation																	.							.	.	.
Alig confidence																	.							.	.	.												.	.	.	.
Template Conservation																																						.	.	.	.
Template Sequence		L	T	A	L	A	L	G	V	L	A	E	K	A	G	I	P	A	G	V	L	Q	I	V	T	G	K	A	R	E	I	G	A	E	L	T	S	.	.	.	.	N	D	T	V	R	K	L	S	F	T	G	S	T	E	V	G	R	L	L	M	A	Q	C	A	P	T	I	K	R	I	S	L	E	L	G	G	N	A	P	F
Template Known Secondary structure															T			T	T	T						S												.	.	.	.		T	T								S													G	G	G	T
Template Predicted Secondary structure																																						.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.					.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.					.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	I	A	D	S	G	A	T	P	D	F	V	A	S	D	L	L	S	Q	A	E	H	G	.	.	.	.	P	D	S	Q	V	I	L	L	T	P	A	A	D	M	A	R	R	V	A	E	A	V	E	R	Q	L	A	E	L	P	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																										.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.																					.	.	.	.											.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.																																			.
Template Sequence		I	V	.	.	F	D	D	A	D	L	D	A	A	V	D	G	A	M	V	S	K	Y	R	N	A	G	Q	T	C	V	C	A	N	R	I	Y	V	Q	.	R	G	V	Y	D	K	F	A	E	K	L	A	A	K	V	K	E	L	K	V	G	N	G	T	E	P	G	V	V	I	G	P	M	I	E	E	K	A	I	T	K
Template Known Secondary structure				.	.		T	T	S															G	G	G	G		S	T	T	S								.																	T			B	S		T	T	S	T	T			B				S
Template Predicted Secondary structure				.	.																																			.
Template SS confidence
		264	.			.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
				296	.	.	.	300	.	.	.	.	.	.	.	.	.	310																																								.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.
Predicted Secondary structure		.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence		.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		.	.	E	T	A	R	Q	A	L	N	A	S	R	L	I	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	L	A	Q	C	V	E	I	S	N	Q	Y	G	P	E	H	.	L	I	I	Q	T	R
Query Conservation		.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Alig confidence		.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation
Template Sequence		V	K	A	H	I	E	D	A	V	S	K	G	A	K	L	I	T	G	G	K	E	L	G	G	L	F	F	E	P	G	I	L	T	G	V	T	S	D	M	L	V	A	K	E	E	T	F	G	P	L	A	P	L	F	A	F	D	T	E	E	E	V	I	A	Q	A	N	D	T	I	F	G	L	A	A	Y	F	Y	T	E
Template Known Secondary structure												T	T								S	B		S	T	T		B										T	T	S					S				S	S																		T		S	S			S							S
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
		334	.				.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		N	A	.	.	.	R	E	L	V	D	S	I	T	S	A	G	S	V	F	L	G	D	W	S	P	E	S	A	G	D	Y	A	S	G	T	N	H	V	L	P	T	Y	G	Y	T	A	T	C	S	S	L	G	L	A	D	F	Q	K	R	M	T	V	Q	E
Query Conservation				.	.	.
Alig confidence				.	.	.									.							.	.										.	.
Template Conservation															.							.	.										.	.
Template Sequence		N	F	S	R	A	I	R	V	S	E	A	L	E	.	Y	G	M	V	G	H	.	.	N	T	G	L	I	S	N	E	V	.	.	A	P	F	G	G	V	K	Q	S	G	L	G	R	E	G	S	K	Y	G	I	E	E	Y	L	E	T	K	Y	I	C	S
Template Known Secondary structure													S		.		S					.	.	S		S					S	S	.	.	S		B			S	G	G	G			S		B	S	T	T	T	S	G	G	G	G
Template Predicted Secondary structure															.							.	.										.	.
Template SS confidence
		421	.	.	.	.	.	.	.	.	430	.	.	.		.	.	.	.	.	.			440	.	.	.	.	.	.	.	.			.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.