Job Description P06988 Confidence 98.27% Date Thu Jan 5 10:59:46 GMT 2012 Rank 34 Aligned Residues 334 % Identity 16% Template c3b4wA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:aldehyde dehydrogenase; PDBTitle: crystal structure of mycobacterium tuberculosis aldehyde dehydrogenase2 complexed with nad+ Resolution 1.80 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		W	N	S	C	T	A	E	Q	Q	R	Q	L	L	M	R	P	A	I	S	A	S	E	S	I	T	R	T	V	N	D	I	L	D	N	V	K	A	R	G	D	E	A	L	R	E	Y	S	A	K	F	D	K	T	T	V	T	A	L	K	V	S	A	E	E	I	A	A	A	S	E	R	L	S	D	E	L	K	Q	.	A
Query Conservation																																																																																.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	P	S	T	P	P	H	E	R	A	A	V	I	A	A	A	V	K	M	L	A	E	R	K	D	L	F	T	K	L	L	A	A	E	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	P	T	I	I	E	T	M	H
Template Known Secondary structure		T	T	T	S																			T														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.																																			100	.	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.
Predicted Secondary structure																					.																																		.																								.	.
Query SS confidence																					.																																		.																								.	.
Query Sequence		M	A	V	A	V	K	N	I	E	T	F	H	T	A	Q	K	L	P	P	.	V	D	V	E	T	Q	P	G	V	R	C	Q	Q	V	T	R	P	V	A	S	V	G	L	Y	I	P	G	G	S	A	P	L	F	.	S	T	V	L	M	L	A	T	P	A	S	I	A	G	C	K	K	V	V	L	C	S	P	.	.	P
Query Conservation																					.																																		.																								.	.
Alig confidence																					.																											.	.	.					.																								.	.
Template Conservation																																																.	.	.
Template Sequence		W	M	G	S	M	G	A	M	N	Y	F	A	G	A	A	D	K	V	T	W	T	E	T	R	T	G	S	Y	G	Q	S	I	V	S	R	E	P	V	G	V	V	G	A	I	V	A	.	.	.	W	N	V	P	L	F	L	A	V	N	K	I	A	P	A	L	L	A	G	C	T	I	V	L	K	P	A	A	E	T	P
Template Known Secondary structure		T												T		G	G	G	S		S							T	T																			.	.	.	S	S	S															T	T								B	T	T	S
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.				.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.
Predicted Secondary structure																			.	.	.																																																										.
Query SS confidence																			.	.	.																																																										.
Query Sequence		P	I	A	D	E	I	L	Y	A	A	Q	L	C	G	V	Q	D	.	.	.	V	F	N	V	G	G	A	Q	A	I	A	A	L	A	F	G	T	E	S	V	P	K	V	D	K	I	F	G	P	G	N	A	F	V	T	E	A	K	R	Q	V	S	Q	R	L	D	G	A	A	I	D	M	P	A	G	P	S	.	E	V
Query Conservation																			.	.	.																																																										.
Alig confidence																			.	.	.																.	.	.	.																											.	.	.										.
Template Conservation																																					.	.	.	.																											.	.	.
Template Sequence		L	T	A	N	A	L	A	E	V	F	A	E	V	G	L	P	E	G	V	L	S	V	V	P	G	G	I	E	T	G	Q	A	L	T	S	.	.	.	.	N	P	D	I	D	M	F	T	F	T	G	S	S	A	V	G	R	E	V	G	R	R	A	A	E	M	.	.	.	L	K	P	C	T	L	E	L	G	G	K	S
Template Known Secondary structure														T	T			T	T	S						B	S								T	T	.	.	.	.		T	T								S															T	.	.	.	T
Template Predicted Secondary structure																																					.	.	.	.																											.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.					.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.				.	.	250	.	.	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.					.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																											.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	I	A	D	S	G	A	T	P	D	F	V	A	S	D	L	L	S	Q	A	E	H	G	P	.	.	.	.	D	S	Q	V	I	L	L	T	P	A	A	D	M	A	R	R	V	A	E	A	V	E	R	Q	L	A	E	L	P	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																											.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.										.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.
Template Sequence		A	A	I	I	L	E	D	V	D	L	A	A	A	I	P	M	M	V	F	S	G	V	M	N	A	G	Q	G	C	V	N	Q	T	R	I	L	A	P	.	R	S	R	Y	D	E	I	V	A	A	V	T	N	F	V	T	A	L	P	V	G	P	P	S	D	P	A	A	Q	I	G	P	L	I	S	E	K	Q	R	T	R
Template Known Secondary structure							T	T																G	G	G	G			T	T									.	G	G	G															S		B			T	T		T	T			B				S
Template Predicted Secondary structure																																								.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
			295	.	.	.	.	300	.	.	.	.	.	.	.	.	.																																												310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.
Predicted Secondary structure		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		.	A	E	T	A	R	Q	A	L	N	A	S	R	L	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	K	D	L	A	Q	C	V	E	I	S	N	Q	Y	G	P	E	H	.	L	I
Query Conservation		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Alig confidence		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation
Template Sequence		V	E	G	Y	I	A	K	G	I	E	E	G	A	R	L	V	C	G	G	G	R	P	E	G	L	D	N	G	F	F	I	Q	P	T	V	F	A	D	V	D	N	K	M	T	I	A	Q	E	E	I	F	G	P	V	L	A	I	I	P	Y	D	T	E	E	D	A	I	A	I	A	N	D	S	V	Y	G	L	A	G	S
Template Known Secondary structure												T	T								S			T	T		T	T	S										S			T	T	S					S				S	S								S	S											S	S			S
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
		330	.	.	.	.	.				.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure								.	.	.
Query SS confidence								.	.	.
Query Sequence		I	Q	T	R	N	A	.	.	.	R	E	L	V	D	S	I	T	S	A	G	S	V	F	L	G	D	W	S	P	E	S	A	G	D	Y	A	S	G	T	N	H	V	L	P	T	Y	G	Y	T	A	T	C	S	S	L	G	L	A	D	F	Q	K	R	M	T	V	Q
Query Conservation								.	.	.
Alig confidence								.	.	.									.																				.	.	.	.	.
Template Conservation																			.																				.	.	.	.	.
Template Sequence		V	W	T	T	D	V	P	K	G	I	K	I	S	Q	Q	I	R	.	T	G	T	Y	G	I	N	W	Y	A	F	D	P	G	S	P	F	G	G	.	.	.	.	.	Y	K	N	S	G	I	G	R	E	N	G	P	E	G	V	E	H	F	T	Q	Q	K	S	V	L
Template Known Secondary structure					S												S		.		S					S	S					T	T	S		B			.	.	.	.	.	S	G	G	G			S		B	S							T	T
Template Predicted Secondary structure																			.																				.	.	.	.	.
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.		.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.						.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.