Job Description P06988 Confidence 96.18% Date Thu Jan 5 10:59:46 GMT 2012 Rank 47 Aligned Residues 347 % Identity 16% Template c2vroB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:aldehyde dehydrogenase; PDBTitle: crystal structure of aldehyde dehydrogenase from2 burkholderia xenovorans lb400 Resolution 1.60 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	N	S	C	T	A	E	Q	Q	R	Q	L	L	M	R	P	A	I	S	A	S	E	S	I	T	R	T	V	N	D	I	L	D	N	V	K	A	R	G	D	E	A	L	R	E	Y	S	A	K	F	D	K	T	T	V	T	A	L	K	V	S	A	E	E	I	A	A	A	S	E	R	L	S	D	E	L	K	Q	A	M
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	R	A	L	T	Y	A	Q	R	A	A	R	L	A	D	I	V	K	L	L	Q	A	K	R	G	D	Y	Y	A	I	A	T	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	T	T	R	N	D	S	A	V	D	I
Template Known Secondary structure					S																			T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90																																			.	.	.	.	.	.	.	.	.	100	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.												.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.																																							.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.																																							.
Query Sequence		A	V	A	V	K	N	I	E	T	F	H	T	A	Q	K	L	P	P	V	.	.	.	.	.	.	.	.	.	.	.	D	V	E	T	Q	P	G	V	R	C	Q	Q	V	T	R	P	V	A	S	V	G	L	Y	I	P	G	G	S	A	P	L	F	S	T	V	L	M	L	.	A	T	P	A	S	I	A	G	C	K	K
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.																																							.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.																										.	.	.											.
Template Conservation																																																									.	.	.
Template Sequence		D	G	G	I	F	T	L	S	Y	Y	A	K	L	G	A	S	L	G	E	V	H	A	L	R	D	G	S	A	E	S	L	S	K	D	R	S	F	S	A	Q	H	V	L	S	P	T	R	G	V	A	L	F	I	N	A	.	.	.	F	N	F	P	S	W	G	L	W	E	K	A	A	P	A	L	L	S	G	V	P	V
Template Known Secondary structure																	T	T		S		S											S	T	T	S												S	S								.	.	.	T	T		T	T													T	T
Template Predicted Secondary structure																																																									.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.				.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.				.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.							.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																						.	.	.					.	.																																			.	.	.	.	.	.
Query SS confidence																						.	.	.					.	.																																			.	.	.	.	.	.
Query Sequence		V	V	L	C	S	P	P	P	I	A	D	E	I	L	Y	A	A	Q	L	C	.	.	.	G	V	Q	D	.	.	V	F	N	V	G	G	A	Q	A	I	A	A	L	A	F	G	T	E	S	V	P	K	V	D	K	I	F	G	P	G	N	A	F	V	.	.	.	.	.	.	T	E	A	K	R	Q	V	S	Q	R	L
Query Conservation																						.	.	.					.	.																																			.	.	.	.	.	.
Alig confidence																						.	.	.					.	.									.	.	.	.	.																						.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.
Template Sequence		I	V	K	P	A	T	A	T	A	W	L	T	Q	R	M	V	A	D	V	V	D	A	G	I	L	P	P	G	A	L	S	I	I	C	G	S	S	.	.	.	.	.	A	G	L	L	D	Q	I	R	S	F	D	V	V	S	F	T	G	S	A	D	T	A	A	T	L	R	A	H	P	A	F	V	Q	R	G	A	R	L
Template Known Secondary structure							G	G	G															T		S		T	T	S						S			.	.	.	.	.	T	T	T	G	G	G			T	T							S										T	S					T	T
Template Predicted Secondary structure																																							.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.						.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.										.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.																																															.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.																																															.	.
Query Sequence		D	G	A	A	I	D	M	P	A	G	P	S	E	V	L	V	I	A	D	S	G	A	T	.	.	.	.	.	.	.	.	.	P	D	F	V	A	S	D	L	L	S	Q	A	E	H	G	P	D	S	Q	V	I	L	L	T	P	A	A	D	M	A	R	R	V	A	E	A	V	E	R	Q	L	A	E	L	P	R	.	.
Query Conservation																									.	.	.	.	.	.	.	.	.																																															.	.
Alig confidence		.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.																										.																					.	.
Template Conservation		.	.	.	.	.	.																																																				.
Template Sequence		.	.	.	.	.	.	N	V	E	A	D	S	L	N	S	A	I	L	C	A	D	A	T	P	D	T	P	A	F	D	L	F	I	K	E	V	V	R	E	M	T	V	K	S	G	Q	K	C	T	A	I	R	R	A	F	V	P	.	E	A	A	L	E	P	V	L	E	A	L	K	A	K	L	A	K	I	T	V	G	N
Template Known Secondary structure		.	.	.	.	.	.														T	T			T	T	S																G	G	G	G			T	T									.	G	G	G													T	T			B	B
Template Predicted Secondary structure		.	.	.	.	.	.																																																				.
Template SS confidence
								255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
																						295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	T	A	R	Q	A	L	N	A	S	R	L	I	V	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	R	N	D	A	V	R	M	G	S	L	V	S	R	E	Q	Y	E	N	V	L	A	G	I	A	A	L	R	E	E	A	V	L	A	Y	D	S	S	A	V	P	L	I	D	A	D	A	N	I	A	A	C	V	A	P	H	L	F	V	V	N	D	P	D	N	A	T	L	L	H	D	V	E	V	F	G	P	V	A	S
Template Known Secondary structure		T	T	S	T	T		S	B				S																	T	T	S							T	T	S			B	S	S		T	T	T	S											S		T	T	T		S	S	T	T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
											312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.			.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370									.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																	.																	.	.																												.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																	.																	.	.																												.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	D	L	A	Q	C	V	E	I	S	N	Q	Y	G	P	E	H	.	L	I	I	Q	T	R	N	A	R	E	L	V	D	S	I	T	.	.	S	A	G	S	V	F	L	G	D	W	S	P	E	S	A	G	D	Y	A	S	G	T	N	H	V	L	P	.	.	.	.	.	.	.	.	T
Query Conservation		.	.	.	.	.	.	.	.	.																	.																	.	.																												.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																	.																	.	.													.															.	.	.	.	.	.	.	.
Template Conservation																																																										.
Template Sequence		V	A	P	Y	R	V	T	A	L	P	E	A	H	A	V	A	L	A	R	R	G	Q	G	S	L	V	A	S	I	Y	S	N	D	D	A	H	L	G	R	L	A	L	E	L	A	D	S	H	G	R	V	H	A	I	S	P	.	S	V	Q	H	S	Q	T	G	H	G	N	V	M	P	M	S	L	H	G	G	P	G	R
Template Known Secondary structure											T	T									T	T	S	S									S													T	T	T									G	.	G	G	T	T	T				S	S				T	T	S					S	G	G
Template Predicted Secondary structure																																																										.
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.		.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	Y	T	A	T	C	S	S	L	G	L	A	D	F	Q	K	R	M	T	V	Q	E	L	S	K	E	G	F	S	A	L	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	G	G	E	E	L	G	G	L	R	A	L	A	F	Y	H	R	R	S	A	I	Q	A	A	S	A	A	I	G	T	L	T	Q
Template Known Secondary structure		G		S					S	G	G	G	G	G	G	G	G																		T
Template Predicted Secondary structure
Template SS confidence
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.