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Job DescriptionP06988
Confidence98.30%DateThu Jan 5 10:59:46 GMT 2012
Rank33Aligned Residues342
% Identity17%Templatec2o2qA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:formyltetrahydrofolate dehydrogenase; PDBTitle: crystal structure of the c-terminal domain of rat2 10'formyltetrahydrofolate dehydrogenase in complex with nadp
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
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Query Sequence  WNSCTAEQQRQLLMRPAISASESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQAM
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Template Sequence  WGKINARDRGRLLYRLADVMEQHQEELATIEALD. . . . . . . . . . . . . . . . . . . . . . . . . . AGAVYTLALKTHVGMSIQTF
Template Known Secondary structure  GGTS
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   477..480.........490.........500.........510 .........520.........530
 
   8990.........100.........110.........120.........130......... 140.........150.........160.. ...
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Query Sequence  AVAVKNIETFHTAQKLPPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLF. STVLMLATPASIAGCKKVVLCSP. . PPI
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Template Sequence  RYFAGWCDKIQGATIPINQ. . ARPNRNLTLTKKEPVGVCGIVIP. . . WNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLT
Template Known Secondary structure  GGG







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   531........540......... 550.........560.........570.. .......580.........590.........600.....
 
   166...170.........180 .........190.........200.........210....... ..220.........230.........
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Query Sequence  ADEILYAAQLCGVQD. . . . VFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEA. . KRQVSQRLDGAAIDMPAGPSEV
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Template Sequence  ALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSD. . . . HPDVRKIGFTGSTEVGKHIMKSCALSNVKKVS. . . LELGGKS
Template Known Secondary structure  TT

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   606...610.........620.........630......... 640.........650.........660.........670. .......
 
   240.........250.........260.... .....270.........280.........290....
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Query Sequence  LVIADSGATPDFVASDLLSQAEHGP. . . . DSQVILLTPAADMARRVAEAVERQLAELPR. . . . . . . . . . . . . . . . . . . . .
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Template Sequence  PLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVE. ESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRK
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GGGG

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   679680.........690.........700.........710...... ...720.........730.........740.........750.......
 
   295....300......... 310. ........320....... ..
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Query Sequence  . AETARQALNASRLIV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TK. . DLAQCVEISNQYGPEH. LI
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Template Sequence  LVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASG
Template Known Secondary structure  TT


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   758.760.........770.........780.........790.........800.........810.........820.........830.......
 
   330..... ....340.........350.........360.........370.........380.........390....
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Query Sequence  IQTRNA. . . RELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTVQE
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Template Sequence  VFTRDINKALYVSDKLQ. AGTVFINTYNKTDVAAPFGGFKQS. . . . GFGKDLGEAALNEYLRIKTVTF
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   838.840.........850.... .....860.........870........ .880.........890.........900
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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