Job Description P06988 Confidence 17.10% Date Thu Jan 5 10:59:46 GMT 2012 Rank 88 Aligned Residues 149 % Identity 10% Template c1zcjA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:peroxisomal bifunctional enzyme; PDBTitle: crystal structure of 3-hydroxyacyl-coa dehydrogenase Resolution 1.90 Å

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		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.				.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.																				.	.	.
Query SS confidence																																																			.																				.	.	.
Query Sequence		S	D	L	L	S	Q	A	E	H	G	P	D	S	Q	V	I	L	L	T	P	A	A	D	M	A	R	R	V	A	E	A	V	E	R	Q	L	A	E	L	P	R	A	E	T	A	R	Q	A	L	.	N	A	S	R	L	I	V	T	K	D	L	A	Q	C	V	E	I	S	N	.	.	.	Q	Y	G	P	E	H	L	I
Query Conservation																																																			.																				.	.	.
Alig confidence											.	.	.	.																																					.													.							.	.	.
Template Conservation											.	.	.	.																																																		.
Template Sequence		A	I	S	F	A	R	V	G	I	.	.	.	.	S	V	V	A	V	E	S	D	P	K	Q	L	D	A	A	K	K	I	I	T	F	T	L	E	K	E	A	S	R	A	H	Q	N	G	Q	A	S	A	K	P	K	L	R	F	S	S	S	T	K	.	E	L	S	T	V	D	L	V	V	E	A	V	F	E	D	M	N
Template Known Secondary structure							T	T	T		.	.	.	.							S	S																									T	T												S		G	G	.	G	G	T	T		S								S
Template Predicted Secondary structure											.	.	.	.																																																		.
Template SS confidence
		312	.	.	.	.	.	.	.	320					.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.		.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		I	Q	T	R	N	A	R	E	L	V	D	S	I	T	S	A	G	S	V	F	L	G	D	W	S	P	E	S	A	G	D	Y	A	S	G	T	N	H	V	L	P	T	Y	G	Y	T	.	A	T	C	S	S	L	G	L	A	D	F	Q	K	R	M	T	V	Q	E	L	S	K	E	G	F	S	A	L	A	S	T	I	E
Query Conservation																																																.
Alig confidence				.																																				.	.							.
Template Conservation				.																																				.	.
Template Sequence		L	K	.	K	K	V	F	A	E	L	S	A	L	C	K	P	G	A	F	L	C	T	N	T	S	A	L	N	V	D	D	I	A	S	S	T	D	R	.	.	P	Q	L	V	I	G	T	H	F	F	S	P	A	H	V	M	R	L	L	E	V	I	P	S	R	Y	S	S	P	T	T	I	A	T	V	M	S	L	S	K
Template Known Secondary structure				.											S		T	T								S	S	S							T	T	S	S		.	.	G	G	G								S	S	T	T	T										S	S
Template Predicted Secondary structure				.																																				.	.
Template SS confidence
		387	.		.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
		409	410
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		464	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions