Return to main results Retrieve Phyre Job Id

Job DescriptionP06988
Confidence98.64%DateThu Jan 5 10:59:46 GMT 2012
Rank17Aligned Residues317
% Identity11%Templatec1vluB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:gamma-glutamyl phosphate reductase; PDBTitle: crystal structure of gamma-glutamyl phosphate reductase (yor323c) from2 saccharomyces cerevisiae at 2.40 a resolution
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
Predicted Secondary structure 

















Query SS confidence 















































































Query Sequence  WNSCTAEQQRQLLMRPAISASESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQAM
Query Conservation     
        
 
        
   
  

  

  

 

  

 



     
 

  

  
   
      

Alig confidence 





































.................











.











Template Conservation   
  
   
  

   
  
    
 
  
   
 
  .................            .        
   
Template Sequence  LKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVA. . . . . . . . . . . . . . . . . KETGLADSLLKR. LDLFKGDKFEVX
Template Known Secondary structure  TTS
T.................S


ST.T
TTSTT
Template Predicted Secondary structure 






..................
Template SS confidence 















































































   18.20.........30.........40.........50..... ....60....... ..70.........
 
   8990.........100.........110.........120.........130.........140.........150.........160........
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  AVAVKNIETFHTAQKLPPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPASIAGCKKVVLCSPPPIADE
Query Conservation    
  

  

  
           

  

   

 


 




 
 






  







  

  


 
 
 
Alig confidence 











































...




.


























Template Conservation                                    




  
  ...    
.       





 





  
  
 
Template Sequence  LQGIKDVAELEDPVGKVKXARELDDGLTLYQVTAPVGVLLVIFE. . . SRPEV. IANITALSIKSGNAAILKGGKESVNTF
Template Known Secondary structure  S

SSS
TT


...

GGG.TTTT

GGG
Template Predicted Secondary structure 
















...


.








Template SS confidence 















































































   80.........90.........100.........110.........120... ..... .130.........140.........150.....
 
   169170........ .180.........190.........200.........210.........220.........230.......
Predicted Secondary structure 

...........






























Query SS confidence 









. . . . . . . . . . .


























































Query Sequence  ILYAAQLCGV. . . . . . . . . . . QDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAAIDMPAGPS
Query Conservation 

 

 
 

...........  

 



























 

  

  
 
 
   


  



Alig confidence 









...........















....
























.
....







Template Conservation       

 


       


  

          
 ....    
  
 



   
  
   
 . ....
   



Template Sequence  REXAKIVNDTIAQFQSETGVPVGSVQLIETDVSDLLD. . . . QDEYIDLVVPRGSNALVRKIKDTTK. I. . . . PVLGHADG
Template Known Secondary structure  T


TTS



TT....
TTT

S
T
S.S....
BTT

S
Template Predicted Secondary structure 










....










.
....



Template SS confidence 















































































   156...160.........170.........180.........190.. .......200.........210....... . .220......
 
   238.240.........250.........260.........270..... ....280.........290.........300....
Predicted Secondary structure 












..


...........
Query SS confidence 





































. .




























. . . . . . . . . . .
Query Sequence  EVLVIADSGATPDFVASDLLSQAEHGPDSQVILLTPAA. . DMARRVAEAVERQLAELPRAETARQALNA. . . . . . . . . . .
Query Conservation 






  
 
  










 
 
 




 
 .. 

  
  

  

  
 
  
   

  ...........
Alig confidence 



















.
















..




























...........
Template Conservation    
 

  



  
   

.     

    

                  
                
     
    
Template Sequence  ICSIYLDEDADLIKAKRISL. DAKTNNAXETLLINPKFSKWWEVLENLTLEGGVTIHATKDLKTAYFDKLNELGKLTEAI
Template Known Secondary structure 
TT

.




TTSTTT



T


Template Predicted Secondary structure 






.


























Template SS confidence 















































































   229230.........240........ .250.........260.........270.........280.........290.........300.......
 
   305....310.........320....... ..330..... ....340.........350.........360
Predicted Secondary structure  ...........





.

...











Query SS confidence  . . . . . . . . . . .






















.







. . .
























Query Sequence  . . . . . . . . . . . SRLIVTKDLAQCVEISNQYGPEH. LIIQTRNA. . . RELVDSITSAGSVFLGDWSPESAGD
Query Conservation  ...........
 

 
  
 

    
  



.


    
...   
  
 







  

 
 

Alig confidence  ...........






















.







...







.





..







Template Conservation       
 




 
  
   



   
    



 
 
 
          
 .

 
 
..
  
    
Template Sequence  QCKTVDADSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFXKGVD. SSGVYW. . NASTRFAD
Template Known Secondary structure  TT





STTS
SS


S


.
SS..SS
GGGG
Template Predicted Secondary structure 


















.

..







Template SS confidence 






































































   313......320.........330.........340.........350.........360...... ...370.. .......380
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions