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Job DescriptionP37388
Confidence100.00%DateThu Jan 5 11:55:35 GMT 2012
Rank3Aligned Residues463
% Identity20%Templatec3ozxA_
PDB info PDB header:hydrolase, translationChain: A: PDB Molecule:rnase l inhibitor; PDBTitle: crystal structure of abce1 of sulfolubus solfataricus (-fes domain)
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10....... ..20.........30.........40.........50.........60.........70.........80......
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Query Sequence  KNITKTFGSV. KAIDNVCLRLNAGEIVSLCGENGSGKSTLMKVLCGIYPHGSYEGEIIFAGEEIQASHIRDTERKGIAII
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Template Sequence  GEVIHRYKVNGFKLFGLP. TPKNNTILGVLGKNGVGKTTVLKILAGEIIPNF. . GDP. . NSKVGKDEVLKRFRGKEIYNY
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SSTTS



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TT

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T..T
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   77..80.........90.... .....100.........110.........120....... ..130 .........140.........150.
 
   87..90 .........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  HQEL. . . . . ALVKELTVLENIFLGNEITHNGIMDYDLMTLRCQKLLAQVSLSISPDTRVGDLGLGQQQLVEIAKALNKQV
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Template Sequence  FKELYSNELKIVHKIQYVEYASKFLKGTVNEILTKIDERGKKDEVKELLNMTNLWNKDANILSGGGLQRLLVAASLLREA
Template Known Secondary structure  TT



S
TTGGGTT

SB

SS
TT
GGGTTSBGGG

S

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   152.......160.........170.........180.........190.........200.........210.........220.........230.
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  RLLILDEPTASLTEQETSILLDIIRDLQQHGIACIYISHKLNEVKAISDTICVIRDGQHIGTRDAAGMSEDDIITMMVGR
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Template Sequence  DVYIFDQPSSYLDVRERMNMAKAIRELL. KNKYVIVVDHDLIVLDYLTDLIHIIYGESSVYGRVSKSYAARVGINNFLKG
Template Known Secondary structure  SSTTTT


.TTS
S

STTT


T
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   232.......240.........250......... 260.........270.........280.........290.........300.........310
 
   242.......250.........260......... 270.........280.........290.........300.........310.........
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Query Sequence  ELTALYPNEPHTTGDEILRIEHLTAWHP. . VNRHIKRVNDVSFSLKRGEILGIAGLVGAGRTETIQCLFGVWPGQWEGKI
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Template Sequence  YLPAENMKIRPDEIKFMLKLKTKMKWTKIIKKLGDFQLVVDNGEAKEGEIIGILGPNGIGKTTFARILVGEITAD. EGSV
Template Known Secondary structure  TTTT
SSS



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TT

TT


TTSSTTSS

S.B

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   311........320.........330.........340.........350.........360.........370.........380..... ....
 
   320.........330.........340.........350.........360.........370.........380.........390.........
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Query Sequence  YIDGKQVDIRNCQQAIAQGIAMVPEDRKRDGIVPVMAVGKNITLAALNKFTGGISQLDDAAEQKCILESIQQLKVKTSSP
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Template Sequence  TPEKQI. . . . . . . . . . . . . LSYKPQRIFP. . . NYDGTVQQYLENASKDALSTSSWF. . . . . . . . . FEEVTKRLNL. HRLL
Template Known Secondary structure  SS


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SS


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SSB
SSTT
TTS.........TTTTTTG.GG
T
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   400..... ....410..... ....420.........430......... 440......... 450...
 
   400.........410.........420.........430.........440.........450.... .....460.........470........
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Query Sequence  DLAIGRLSGGNQQKAILARCLLLNPRILILDEPTRGIDIGAKYEIYKLINQLVQQ. GIAVIVISSELPEVLGLSDRVLVM
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Template Sequence  ESNVNDLSGGELQKLYIAATLAKEADLYVLDQPSSYLDVEERYIVAKAIKRVTRERKAVTFIIDHDLSIHDYIADRIIVF
Template Known Secondary structure  TSBGGG

S

SSTTTT

TT

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   454.....460.........470.........480.........490.........500.........510.........520.........530...
 
   479480.........490.........500...
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Query Sequence  HEGKLKANLINHNLTQEQVMEAALR
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Template Conservation   
                       
Template Sequence  KGEPEKAGLATSPVTLKTGMNEFLR
Template Known Secondary structure  TTT


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   534.....540.........550........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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