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Job DescriptionP37388
Confidence97.44%DateThu Jan 5 11:55:35 GMT 2012
Rank124Aligned Residues150
% Identity16%Templatec3ldaA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:dna repair protein rad51; PDBTitle: yeast rad51 h352y filament interface mutant
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  LNAGEIVSLCGENGSGKSTLM. KVLCGIYPHGSYEGEIIFAGEEIQASHIRDTERKGIAIIHQELALVKELTVLENIFLG
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Template Sequence  VETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGG. . . . . . . . . . . . . . . . . EGKCLYIDTEGTFRP. . . . . . . . . . .
Template Known Secondary structure  TTSSTTSSTTS
GGGT

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   175....180.........190.........200.........210. ........220......
 
   106...110.........120.........130... ......140.........150.........160.........170...
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Query Sequence  NEITHNGIMDYDLMTLRCQKLLAQVSLS. . . . . . . ISPDTRVGDLGLGQQQLVEIAKALNKQVRLLILDEPTASL. . . . .
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Template Sequence  . . . . . . . . . . . . . . . VRLVSIAQRFGLDPDDALNNVAYARAYNADHQLRLLDAAAQMMSESRFSLIVVDSVMALYRGELS
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   227..230.........240.........250.........260.........270.........280.........290.
 
   174.....180.........190.........200.........210.........
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Query Sequence  . TEQETSILLDIIRDLQQHGIACIYISHKLNEVKAISDTICVIRDGQ
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Template Sequence  ARQMHLAKFMRALQRLADQFGVAVVVTNQVNIMAYSSTTRLGFKKGK
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   298.300.........310.........320.........330.........340....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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