Job Description P37388 Confidence 100.00% Date Thu Jan 5 11:55:35 GMT 2012 Rank 25 Aligned Residues 227 % Identity 26% Template c3gfoA_ PDB info PDB header:atp binding protein Chain: A: PDB Molecule:cobalt import atp-binding protein cbio 1; PDBTitle: structure of cbio1 from clostridium perfringens: part of2 the abc transporter complex cbionq. Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.
Predicted Secondary structure																	.																																																													.
Query SS confidence																	.																																																													.
Query Sequence		P	Y	L	L	E	M	K	N	I	T	K	T	F	G	S	.	V	K	A	I	D	N	V	C	L	R	L	N	A	G	E	I	V	S	L	C	G	E	N	G	S	G	K	S	T	L	M	K	V	L	C	G	I	Y	P	H	G	S	Y	E	G	E	I	I	F	A	G	E	E	I	Q	A	S	H	I	R	.	D	T	E
Query Conservation																	.																																																													.
Alig confidence																	.																																											.	.																	.
Template Conservation																																																												.	.
Template Sequence		D	Y	I	L	K	V	E	E	L	N	Y	N	Y	S	D	G	T	H	A	L	K	G	I	N	M	N	I	K	R	G	E	V	T	A	I	L	G	G	N	G	V	G	K	S	T	L	F	Q	N	F	N	G	I	L	K	P	S	S	.	.	G	R	I	L	F	D	N	K	P	I	D	Y	S	R	K	G	I	M	K	L
Template Known Secondary structure															T	T	S													T	T	S								T	T	S	S									T	T	S	S			S		.	.						T	T						S
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		R	K	G	I	A	I	I	H	Q	E	L	.	A	L	V	K	E	L	T	V	L	E	N	I	F	L	G	N	E	I	T	H	N	G	I	M	D	Y	D	L	M	T	L	R	C	Q	K	L	L	A	Q	V	S	L	S	I	S	P	D	T	R	V	G	D	L	G	L	G	Q	Q	Q	L	V	E	I	A	K	A	L	N
Query Conservation													.
Alig confidence													.																		.	.	.
Template Conservation																															.	.	.
Template Sequence		R	E	S	I	G	I	V	F	Q	D	P	D	N	Q	L	F	S	A	S	V	Y	Q	D	V	S	F	G	A	V	.	.	.	N	M	K	L	P	E	D	E	I	R	K	R	V	D	N	A	L	K	R	T	G	I	E	H	L	K	D	K	P	T	H	C	L	S	F	G	Q	K	K	R	V	A	I	A	G	V	L	V
Template Known Secondary structure				S						S	S	G	G	G	T			S	S	B											.	.	.	T	S																		T	T		G	G	G	T	T	S	B	G	G	G	S															T
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		K	Q	V	R	L	L	I	L	D	E	P	T	A	S	L	T	E	Q	E	T	S	I	L	L	D	I	I	R	D	L	Q	Q	H	.	G	I	A	C	I	Y	I	S	H	K	L	N	E	V	K	A	I	S	D	T	I	C	V	I	R	D	G	Q	H	I	G	T	R	D	A	A	G	M	S	E	D	D
Query Conservation																																			.
Alig confidence																																			.
Template Conservation
Template Sequence		M	E	P	K	V	L	I	L	D	E	P	T	A	G	L	D	P	M	G	V	S	E	I	M	K	L	L	V	E	M	Q	K	E	L	G	I	T	I	I	I	A	T	H	D	I	D	I	V	P	L	Y	C	D	N	V	F	V	M	K	E	G	R	V	I	L	Q	G	N	P	K	E	V	F	A	E	K
Template Known Secondary structure		T			S							T	T	T	T																													S			S	S	G	G	G	G		S							T	T												T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions