Job Description P37388 Confidence 100.00% Date Thu Jan 5 11:55:35 GMT 2012 Rank 29 Aligned Residues 290 % Identity 19% Template c3d31B_ PDB info PDB header:transport protein Chain: B: PDB Molecule:sulfate/molybdate abc transporter, atp-binding PDBTitle: modbc from methanosarcina acetivorans Resolution 3.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	E	M	K	N	I	T	K	T	F	G	S	V	K	A	I	D	N	V	C	L	R	L	N	A	G	E	I	V	S	L	C	G	E	N	G	S	G	K	S	T	L	M	K	V	L	C	G	I	Y	P	H	G	S	Y	E	G	E	I	I	F	A	G	E	E	I	Q	A	S	H	I	R	D	T	E	R	K	G	I
Query Conservation
Alig confidence																.																																									.	.																				.	.	.
Template Conservation																.																																									.	.																				.	.	.
Template Sequence		M	I	E	I	E	S	L	S	R	K	W	K	N	F	.	S	L	D	N	L	S	L	K	V	E	S	G	E	Y	F	V	I	L	G	P	T	G	A	G	K	T	L	F	L	E	L	I	A	G	F	H	V	P	D	S	.	.	G	R	I	L	L	D	G	K	D	V	T	D	L	S	P	E	K	H	D	.	.	.	I
Template Known Secondary structure													S	S		.											T	T										T												T	S	S			S		.	.						T	T				T	T	S						T	.	.	.
Template Predicted Secondary structure																.																																									.	.																				.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	I	H	Q	E	L	A	L	V	K	E	L	T	V	L	E	N	I	F	L	G	N	E	I	T	H	N	G	I	M	D	Y	D	L	M	T	L	R	C	Q	K	L	L	A	Q	V	S	L	S	I	S	P	D	T	R	V	G	D	L	G	L	G	Q	Q	Q	L	V	E	I	A	K	A	L	N	K	Q	V	R	L
Query Conservation
Alig confidence																													.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.
Template Sequence		A	F	V	Y	Q	N	Y	S	L	F	P	H	M	N	V	K	K	N	L	E	F	G	M	R	M	K	K	.	.	.	.	.	.	I	K	D	P	K	R	V	L	D	T	A	R	D	L	K	I	E	H	L	L	D	R	N	P	L	T	L	S	G	G	E	Q	Q	R	V	A	L	A	R	A	L	V	T	N	P	K	I
Template Known Secondary structure						T	T					T	T	S															.	.	.	.	.	.														T	T		T	T	T	T	T	S		G	G	G	S														T	T	S			S
Template Predicted Secondary structure																													.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.							.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.
Predicted Secondary structure																											.																																																					.
Query SS confidence																											.																																																					.
Query Sequence		L	I	L	D	E	P	T	A	S	L	T	E	Q	E	T	S	I	L	L	D	I	I	R	D	L	.	Q	Q	H	G	I	A	C	I	Y	I	S	H	K	L	N	E	V	K	A	I	S	D	T	I	C	V	I	R	D	G	Q	H	I	G	T	R	D	A	A	G	M	S	E	D	D	I	I	T	M	M	V	G	.	R
Query Conservation																											.																																																					.
Alig confidence																											.																																																					.
Template Conservation
Template Sequence		L	L	L	D	E	P	L	S	A	L	D	P	R	T	Q	E	N	A	R	E	M	L	S	V	L	H	K	K	N	K	L	T	V	L	H	I	T	H	D	Q	T	E	A	R	I	M	A	D	R	I	A	V	V	M	D	G	K	L	I	Q	V	G	K	P	E	E	I	F	E	K	P	V	E	G	R	V	A	S	F	V
Template Known Secondary structure						S	S	S	T	T	S																			T	T								S										S						S	S	S													S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	T	A	L	Y	P	N	E	P	H	T	T	G	D	E	I	L	R	I	E	H	L	T	A	W	H	P	V	N	R	H	I	K	R	V	N	D	V	S	F	S	L	K	R	G	E	I	L	G	I	A	G	L	V	G	A	G	R	T	E	T	I	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	E	N	V	L	K	G	R	V	I	S	A	E	Q	G	L	L	R	I	R	V	G	E	V	V	I	D	A	A	G	D	M	E	V	G	D	Q	V	Y	A	F	L	R	P	E	N	I	A	L	S	K	S	S	T	Q	S	S	I	R	N	S	L	Q
Template Known Secondary structure			S													T	T							T	T							S	S			T	T									G	G	G					S	S					S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions