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Job DescriptionP37388
Confidence97.81%DateThu Jan 5 11:55:35 GMT 2012
Rank103Aligned Residues159
% Identity16%Templatec2zjbB_
PDB info PDB header:recombinationChain: B: PDB Molecule:meiotic recombination protein dmc1/lim15 homolog; PDBTitle: crystal structure of the human dmc1-m200v polymorphic2 variant
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40....... ..50.........60.........70.........80.........90.........100.....
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Query Sequence  LNAGEIVSLCGENGSGKSTLM. KVLCGIYPHGSYEGEIIFAGEEIQASHIRDTERKGIAIIHQELALVKELTVLENIFLG
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Template Sequence  IESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYP. . . . . . . . . . . . . . . . . GGKIIFIDTENTFRPDRLRDIADRFN
Template Known Secondary structure  SSS

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   116...120.........130.........140.........150.. .......160.........170........
 
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Query Sequence  NEITHNGIMDYDLMTLRCQKLLAQVSLSISPDTRVGDLGLGQQQLVEIAKALNKQVRLLILDEPTASLTEQ. . . . . . . . .
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Template Sequence  VD. . . . . . . . . . . . . . . HDAVLD. . NVLYARAYTSEHQVELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAE
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   179180 ...... ...190.........200.........210.........220.........230.........240.
 
   177..180........ .190.........200.........210.........
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Query Sequence  . . . ETSILLDIIRDL. QQHGIACIYISHKLNEVKAISDTICVIRDGQ
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Template Sequence  RQQKLAQMLSRLQKISEEYNVAVFVTNQMGHILAHASTTRISLRKGR
Template Known Secondary structure  TT





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   242.......250.........260.........270.........280........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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