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Job DescriptionP37388
Confidence100.00%DateThu Jan 5 11:55:35 GMT 2012
Rank19Aligned Residues227
% Identity22%Templatec2d62A_
PDB info PDB header:sugar binding proteinChain: A: PDB Molecule:multiple sugar-binding transport atp-binding PDBTitle: crystal structure of multiple sugar binding transport atp-2 binding protein
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70........
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Query Sequence  PYLLEMKNITKTFGSVKAIDNVCLRLNAGEIVSLCGENGSGKSTLMKVLCGIYPHGSYEGEIIFAGEEIQASHIRDT. . .
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Template Sequence  XAEVKLINIWKRFGDVTAVKDLSLEIKDGEFLVLLGPSGCGKTTTLRXIAGLEEPTR. . GQIYIEDNLVADPEKGVFVPP
Template Known Secondary structure 

STT
TT

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S..TTGGGT

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   4.....10.........20.........30.........40.........50.........60 .........70.........80.
 
   7980.........90.........100.........110.........120.........130.........140.........150........
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Query Sequence  ERKGIAIIHQELALVKELTVLENIFLGNEITHNGIMDYDLMTLRCQKLLAQVSLSISPDTRVGDLGLGQQQLVEIAKALN
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Template Sequence  KERDVAXVFQSYALYPHXTVYDNIAFPLK. . . LRKVPKQEIDKRVREVAEXLGLTELLNRKPRELSGGQRQRVALGRAII
Template Known Secondary structure  T


S



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   82.......90.........100.........110 .........120.........130.........140.........150........
 
   159160.........170.........180........ .190.........200.........210.........220.........230...
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Query Sequence  KQVRLLILDEPTASLTEQETSILLDIIRDL. QQHGIACIYISHKLNEVKAISDTICVIRDGQHIGTRDAAGMSEDD
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Template Sequence  RRPKVFLXDEPLSNLDAKLRVKXRAELKKLQRQLGVTTIYVTHDQVEAXTXGDRIAVXNKGELQQVGTPDEVYYKP
Template Known Secondary structure  S

SSTTTT

T
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   159160.........170.........180.........190.........200.........210.........220.........230....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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