Job Description P37388 Confidence 97.46% Date Thu Jan 5 11:55:35 GMT 2012 Rank 122 Aligned Residues 121 % Identity 21% Template c1xp8A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:reca protein; PDBTitle: "deinococcus radiodurans reca in complex with atp-gamma-s" Resolution 2.50 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		L	N	A	G	E	I	V	S	L	C	G	E	N	G	S	G	K	S	T	L	M	.	K	V	L	C	G	I	Y	P	H	G	S	Y	E	G	E	I	I	F	A	G	E	E	I	Q	A	S	H	I	R	D	T	E	R	K	G	I	A	I	I	H	Q	E	L	A	L	V	K	E	L	T	V	L	E	N	I	F	L	G
Query Conservation																							.
Alig confidence																							.											.	.	.																				.	.	.
Template Conservation																																		.	.	.																				.	.	.
Template Sequence		I	P	R	G	R	I	T	E	I	Y	G	P	E	S	G	G	K	T	T	L	A	L	A	I	V	A	Q	A	Q	K	A	G	.	.	.	G	T	C	A	F	I	D	A	E	H	A	L	D	P	V	Y	A	R	A	.	.	.	L	G	V	N	T	D	E	L	L	V	S	Q	P	D	N	G	E	Q	A	L	E	I	M
Template Known Secondary structure				T	T	S							S	T	T	S	S															T	T	.	.	.								S	S											.	.	.	T	T			G	G	G							S	S
Template Predicted Secondary structure																																		.	.	.																				.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.						.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																																																.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.
Query Sequence		N	E	I	T	H	N	G	I	M	D	Y	D	L	M	T	L	R	C	Q	K	L	L	A	Q	V	S	L	S	I	S	P	D	T	R	V	G	D	L	G	L	G	Q	Q	Q	L	V	E	I	A	K	A	L	N	K	Q	V	R	L	L	I	L	D	.	.	.	.	.	E	P	T	A	S	L	T	E	Q	E	T	S	I
Query Conservation																																																																.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	L	V	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	I	D	V	V	V	V	D	S	V	A	A	L	T	P	R	A	E	I	P	G	L	Q	A	R	L
Template Known Secondary structure						T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T			S							T	T	T				S	T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.																																																.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		181	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		L	L	D	I	I	R	D	L	.	.	.	.	Q	Q	H	G	I	A	C	I	Y	I	S	H
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.
Template Conservation
Template Sequence		M	S	Q	A	L	R	K	L	T	A	I	L	S	K	T	G	T	A	A	I	F	I	N	Q
Template Known Secondary structure														T	T	T
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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