Job Description P37388 Confidence 97.93% Date Thu Jan 5 11:55:35 GMT 2012 Rank 100 Aligned Residues 182 % Identity 15% Template c1mkyA_ PDB info PDB header:ligand binding protein Chain: A: PDB Molecule:probable gtp-binding protein enga; PDBTitle: structural analysis of the domain interactions in der, a2 switch protein containing two gtpase domains Resolution 1.90 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	S	L	C	G	E	N	G	S	G	K	S	T	L	M	K	V	L	C	G	I	Y	P	H	G	S	Y	E	G	E	I	I	F	A	G	E	E	I	Q	A	S	H	I	R	D	T	E	R	K	G	I	A	I	I	H	Q	E	L	A	L	V	K	E	L	T	V	L	E	N	I	F	L	G	N	E	I	T	H	N
Query Conservation
Alig confidence																							.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	L	I	V	G	R	P	N	V	G	K	S	T	L	F	N	K	L	V	K	.	.	.	.	D	P	V	Q	D	T	V	E	W	Y	G	K	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T	S	S											.	.	.	.			S							T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.					.	.	.	.	.	.	30	.	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	M	D	Y	D	L	M	T	L	R	C	Q	K	L	L	A	Q	V	S	L	S	I	S	P	D	T	R	V	G	D	L	G	L	G	Q	Q	Q	L	V	E	I	A	K	A	L	N	K	Q	V	R	L	L	I	L	D	E	P	T	A	S	L	T	E	Q	E	T	S	I	L	L	D	I	I	R	D	L	Q	Q	H
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.																								.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.																								.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	K	L	V	D	T	C	G	V	F	D	N	P	Q	D	I	I	S	Q	K	X	K	E	V	T	L	.	.	N	X	I	R	E	A	D	L	V	L	F	V	V	D	G	K	R	G	I	T	K	E	D	.	.	.	.	E	S	L	A	D	F	L	R	K	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T	T	S	S	G	G	G												.	.				T	T		S								T	T	T							.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.																								.	.	.	.
Template SS confidence
																	51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.					100	.	.	.	.	.	.	.	.	.
		192	.	.	.	.	.					.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.
Query SS confidence								.	.	.	.
Query Sequence		G	I	A	C	I	Y	.	.	.	.	I	S	H	K	L	N	E	V	K	A	I	S	D	T	I	C	V	I	R	D	G	Q	H	I	G	T	R	D	A	A	G	M	S	E	D	D	I	I	T	M	M	V	G	R	E	L	T	A	L	Y	P	N	E	P	H	T	T	G	D	E	I	L	R	I	E	H	L	T	A	W
Query Conservation								.	.	.	.
Alig confidence								.	.	.	.																																																																.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		T	V	D	T	I	L	V	A	N	K	A	E	N	L	R	E	F	E	R	E	V	K	P	E	L	Y	S	L	G	F	G	E	P	I	P	V	S	A	E	H	N	I	N	L	D	T	X	L	E	T	I	I	K	K	L	E	E	K	G	L	D	L	E	S	K	P	E	I	T	D	A	I	K	.	.	.	.	.	.	.
Template Known Secondary structure		T									S			S								T					G	G	G	S	S		S					B	T	T	T	T	B	S															T	T			S	S	S						S				.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	P	V	N	R	H	I	K	R	V	N	D	V	S	F	S	L	K	R	G	E	I	L	G	I	A	G	L	V	G	A	G	R	T	E	T	I	Q	C	L	F	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	I	V	G	R	P	N	V	G	K	S	T	L	F	N	A	I	L	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	T	T	S	S										T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																								183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions