Job Description P37388 Confidence 98.17% Date Thu Jan 5 11:55:35 GMT 2012 Rank 94 Aligned Residues 136 % Identity 19% Template c1ewqA_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:dna mismatch repair protein muts; PDBTitle: crystal structure taq muts complexed with a heteroduplex2 dna at 2.2 a resolution Resolution 2.20 Å

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		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	V	S	F	S	L	K	R	G	E	I	L	G	I	A	G	L	V	G	A	G	R	T	E	T	I	Q	C	L	F	G	V	W	P	G	Q	W	E	G	K	I	Y	I	D	G	K	Q	V	D	I	R	N	C	Q	Q	A	I	A	Q	G	I	A	M	V	P	E	D	R	K	R	D	G	I	V	P	V	M	A	V
Query Conservation
Alig confidence								.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Conservation								.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Sequence		N	D	L	E	X	A	.	.	.	H	E	L	V	L	I	T	G	P	N	X	A	G	K	S	T	F	L	R	Q	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	A	L	L	A	Q	V	G	S	F	V	P	A	E	E	A	H	L	P	L	F	D	G	I	.	.
Template Known Secondary structure							S	.	.	.	S							S		S	S	S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T			B	S	S	S								S			.	.
Template Predicted Secondary structure								.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template SS confidence
		570	.	.	.	.	.				.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.																							.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	N	I	T	L	A	A	L	N	K	F	T	G	G	I	S	Q	L	D	D	A	A	E	Q	K	C	I	L	E	S	I	Q	Q	L	K	V	K	T	S	S	P	D	L	A	I	G	R	L	S	G	G	N	Q	Q	K	A	I	L	A	R	C	L	L	L	N	P	R	I	L	I	L	D	E	P	T	R	G	I	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	Y	T	R	I	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	S	T	F	X	V	.	.	.	.	.	.	.	.	.	.	E	X	E	E	V	A	L	I	L	K	E	A	T	E	N	S	L	V	L	L	D	E	V	G	R	G	T	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S					.	.	.	.	.	.	.	.	.	.														T	T							S	T	T	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.
Template SS confidence
													623	.	.	.	.	.																			.	630	.	.	.	.	.											.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.
		438	.	440	.	.	.	.	.	.	.	.		.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		I	G	A	K	Y	E	I	Y	K	L	I	.	N	Q	L	V	Q	Q	G	I	A	V	I	V	I	S	S	E	L	P	E	V	L	G	L	S	D	R	V	L	V	M	H
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		S	L	D	G	V	A	I	A	T	A	V	A	E	A	L	H	E	R	R	A	Y	T	L	F	A	T	H	Y	F	E	L	T	A	L	G	L	P	R	L	K	N	L	H
Template Known Secondary structure																				T														T				T	T
Template Predicted Secondary structure
Template SS confidence
		670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions