Return to main results Retrieve Phyre Job Id

Job DescriptionP30750
Confidence100.00%DateThu Jan 5 11:46:26 GMT 2012
Rank17Aligned Residues228
% Identity36%Templatec3gfoA_
PDB info PDB header:atp binding proteinChain: A: PDB Molecule:cobalt import atp-binding protein cbio 1; PDBTitle: structure of cbio1 from clostridium perfringens: part of2 the abc transporter complex cbionq.
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKA
Query Conservation 

    
 
 
         
  


 
  

   
 
 








  
 
      
 
   
              
Alig confidence 














...


















































.









Template Conservation   
    
   
    ...  
  

  
  

   


 








  
 
      
 
 
 
  
.          
Template Sequence  ILKVEELNYNYSDGT. . . HALKGINMNIKRGEVTAILGGNGVGKSTLFQNFNGILKPSSGRILFDNKPI. DYSRKGIMKL
Template Known Secondary structure 
TTS
...TTS

TTSSTTSS

STT
.

S
Template Predicted Secondary structure 



...
























.





Template SS confidence 















































































   5....10......... 20.........30.........40.........50.........60.........70 .........80
 
   81........90. ........100.........110.........120.........130.........140.........150.........
Predicted Secondary structure 





.


































Query SS confidence 










.



































































Query Sequence  RRQIGMIFQHF. NLLSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNP
Query Conservation     
  
 
  . 
    

                         
    
          




 


 

 

   
Alig confidence 










.



































































Template Conservation     
    
         

 
 
                     
    
          

 
  


 

 

   
Template Sequence  RESIGIVFQDPDNQLFSASVYQDVSFGAVNMKLPEDEIRKRVDNALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVMEP
Template Known Secondary structure  S
SSGGGT

SSBTS


TT
GGGTTSBGGGS
TT

Template Predicted Secondary structure 
































Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   160.........170.........180.........190.........200.........210.........220.........230..
Predicted Secondary structure 





















Query SS confidence 








































































Query Sequence  KVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHP
Query Conservation   







  

      
   
  
    
 


 


       
 
 
 

  
 
   
         
Alig confidence 








































































Template Conservation   






  


      
   
         


  

         
 
 

  
 
   
   

    
Template Sequence  KVLILDEPTAGLDPMGVSEIMKLLVEMQKELGITIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAEK
Template Known Secondary structure  S
TTTT



S

SSGGGG
STT
T
Template Predicted Secondary structure 


















Template SS confidence 








































































   161........170.........180.........190.........200.........210.........220.........230...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions