Return to main results Retrieve Phyre Job Id

Job DescriptionP30750
Confidence96.90%DateThu Jan 5 11:46:26 GMT 2012
Rank207Aligned Residues123
% Identity21%Templatec3dmdA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.........70.........80.........90.........100........
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Query Sequence  PAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLE
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Template Sequence  EKPYVIMFVGFNGSGKTTTIAKLANWLKNHGFSVVIAASDT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   121........130.........140.........150.........160.
 
   109110.........120.........130.........140.........150.........160........ .170.........180.......
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Query Sequence  LDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEAT. SALDPATTRSILELLKDIN
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Template Sequence  . . . . FRAGAIEQLEEHAKRIGVKVIKHSYGADPAAVAYDAIQHAK. . ARGIDVVLIDTAGRSETNRNLMDEMKKIARVTK
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   162.......170.........180.........190.........200.. .......210.........220.........230.....
 
   188.190........
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Query Sequence  RRLGLTILLIT
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Template Sequence  P. . NLVIFVGD
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   236 ...240....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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