Job Description P30750 Confidence 96.69% Date Thu Jan 5 11:46:26 GMT 2012 Rank 253 Aligned Residues 132 % Identity 18% Template c2v1uA_ PDB info PDB header:replication Chain: A: PDB Molecule:cell division control protein 6 homolog; PDBTitle: structure of the aeropyrum pernix orc1 protein in complex2 with dna Resolution 3.10 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	G	Q	I	Y	G	V	I	G	A	S	G	A	G	K	S	T	L	I	R	C	V	N	L	L	E	R	P	T	E	G	S	V	L	V	D	G	Q	E	L	T	T	L	S	E	S	E	L	T	K	A	R	R	Q	I	G	M	I	F	Q	H	F	N	L	L	S	S	R	T	V	F	G	N	V	A	L	P	L	E
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	P	S	N	A	L	L	Y	G	L	T	G	T	G	K	T	A	V	A	R	L	V	L	R	R	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	A	S	S	L	G	V	L	V	K	P	I	Y	V	N	A	R	H	R	E	T	P	Y	R	V	A	S	A	I	A	E
Template Known Secondary structure											B		T	T	S	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T										T	T	T	S		S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.																					.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	N	T	P	K	D	E	V	K	R	R	V	T	E	L	L	S	L	V	G	L	G	D	K	H	D	S	Y	P	S	N	L	S	G	G	Q	K	Q	R	V	A	I	A	R	A	L	A	S	N	P	K	V	L	L	C	D	E	A	T	S	A	L	D	P	A	T	T	R	S	I	L	E	L	L	K	D	I	N	R
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	G	V	R	V	P	F	T	G	L	S	V	G	E	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	L	V	K	R	L	S	R	L	R	G	I	Y	I	I	V	L	D	E	I	D	F	L	P	K	R	P	G	G	Q	D	L	L	Y	R	I	T	R	I	N	Q
Template Known Secondary structure				S					S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	S		S								T	T	T					S	T	T											G	G	G
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130																						.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	G	L	T	I	L	L	I	T	H	E	M	D
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		E	.	L	V	S	L	V	G	I	T	N	S	L	G
Template Known Secondary structure			.									S		S	T
Template Predicted Secondary structure			.
Template SS confidence
		173		.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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