Job Description P30750 Confidence 100.00% Date Thu Jan 5 11:46:26 GMT 2012 Rank 12 Aligned Residues 252 % Identity 33% Template c2d62A_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:multiple sugar-binding transport atp-binding PDBTitle: crystal structure of multiple sugar binding transport atp-2 binding protein Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	K	L	S	N	I	T	K	V	F	H	Q	G	T	R	T	I	Q	A	L	N	N	V	S	L	H	V	P	A	G	Q	I	Y	G	V	I	G	A	S	G	A	G	K	S	T	L	I	R	C	V	N	L	L	E	R	P	T	E	G	S	V	L	V	D	G	Q	E	L	T	T	L	S	E	S	E	L	T	K	A
Query Conservation
Alig confidence																.	.	.	.
Template Conservation																.	.	.	.
Template Sequence		E	V	K	L	I	N	I	W	K	R	F	G	D	V	.	.	.	.	T	A	V	K	D	L	S	L	E	I	K	D	G	E	F	L	V	L	L	G	P	S	G	C	G	K	T	T	T	L	R	X	I	A	G	L	E	E	P	T	R	G	Q	I	Y	I	E	D	N	L	V	A	D	P	E	K	G	V	F	V	P	P
Template Known Secondary structure		S											T	T		.	.	.	.												T	T								S	T	T	S	S										T	S	S			S							T	T						G	G	G	T
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.					20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		81	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		R	R	Q	.	I	G	M	I	F	Q	H	F	N	L	L	S	S	R	T	V	F	G	N	V	A	L	P	L	E	L	D	N	T	P	K	D	E	V	K	R	R	V	T	E	L	L	S	L	V	G	L	G	D	K	H	D	S	Y	P	S	N	L	S	G	G	Q	K	Q	R	V	A	I	A	R	A	L	A	S	N	P
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		K	E	R	D	V	A	X	V	F	Q	S	Y	A	L	Y	P	H	X	T	V	Y	D	N	I	A	F	P	L	K	L	R	K	V	P	K	Q	E	I	D	K	R	V	R	E	V	A	E	X	L	G	L	T	E	L	L	N	R	K	P	R	E	L	S	G	G	Q	R	Q	R	V	A	L	G	R	A	I	I	R	R	P
Template Known Secondary structure					T							S					T	T	S												T	T	T																	T	T		G	G	G	T	T			G	G	G	S															S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	L	L	C	D	E	A	T	S	A	L	D	P	A	T	T	R	S	I	L	E	L	L	K	D	I	N	R	R	L	G	L	T	I	L	L	I	T	H	E	M	D	V	V	K	R	I	C	D	C	V	A	V	I	S	N	G	E	L	I	E	Q	D	T	V	S	E	V	F	S	H	P	K	T	P	L	A	Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	F	L	X	D	E	P	L	S	N	L	D	A	K	L	R	V	K	X	R	A	E	L	K	K	L	Q	R	Q	L	G	V	T	T	I	Y	V	T	H	D	Q	V	E	A	X	T	X	G	D	R	I	A	V	X	N	K	G	E	L	Q	Q	V	G	T	P	D	E	V	Y	Y	K	P	V	N	T	F	V	A	G
Template Known Secondary structure		S						S	T	T	T	T																					T								S										S							T	T														S		S	B
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	Q	S	T	L	H	L	D	I	P	E	D	Y	Q	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	G	S	P	P	X	N	F	L	D	A	T	I	T	D	D
Template Known Secondary structure			S	S	S	S											T	T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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