Job Description P30750 Confidence 98.84% Date Thu Jan 5 11:46:26 GMT 2012 Rank 88 Aligned Residues 161 % Identity 17% Template c1wxqA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:gtp-binding protein; PDBTitle: crystal structure of gtp binding protein from pyrococcus horikoshii2 ot3 Resolution 2.60 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	G	V	I	G	A	S	G	A	G	K	S	T	L	I	R	C	V	N	L	L	E	R	P	T	E	G	S	V	L	V	D	.	G	Q	E	L	T	T	L	S	E	S	E	L	T	K	A	R	R	Q	I	G	M	I	F	Q	H	F	N	L	L	S	S	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																		.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	G	V	V	G	K	P	N	V	G	K	S	T	F	F	S	A	A	T	L	A	N	V	G	V	T	Y	A	I	T	D	H	P	C	K	E	L	G	C	S	P	N	P	Q	N	Y	E	Y	R	N	G	L	A	L	I	P	V	K	X	V	D	V	A	F	L	D	D	L	R	X	A	S	A	L	I	H	V	V	D	A
Template Known Secondary structure								T	T	S	S																							S		S	S	S			S				S	S	S				T	T																S	S	T	T		S								T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
																		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	G	N	V	A	L	P	L	E	L	D	N	T	P	K	D	E	V	K	R	R	V	T	E	L	L	S	L	V	G	L	G	D	K	.	H	D	S	Y	P	S	N	L	S	G	G	Q	K	Q	R	V	A	I	A	R	A	L	A	S	N	P	K	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template Conservation
Template Sequence		T	G	K	T	D	P	E	G	Q	P	T	D	Y	H	D	P	V	E	D	I	E	F	L	E	R	E	I	D	Y	W	I	Y	G	I	L	S	K	G	W	D	K	F	A	K	R	I	K	L	Q	K	I	K	L	E	S	A	I	A	E	H	L	S	G	I	G	V	N	E	N	D	V	W	E	A	X	H	K	L	N	L
Template Known Secondary structure		T			B		T	T	S		B		S																									T	T	T					S	T	T	T	S	S												T	G	G	G	T													T	T
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	C	D	E	A	T	S	A	L	D	P	A	T	T	R	S	I	L	E	L	L	K	D	I	N	R	R	L	G	L	T	I	L	L	I	T	H	E
Query Conservation
Alig confidence																				.	.								.	.	.	.
Template Conservation																				.	.								.	.	.	.
Template Sequence		P	E	D	P	T	K	W	S	Q	D	D	L	L	A	F	A	S	E	.	.	I	R	R	V	N	K	P	.	.	.	.	X	V	I	A	A	N	K	A
Template Known Secondary structure			S		G	G	G													.	.						S		.	.	.	.								G
Template Predicted Secondary structure																				.	.								.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.					.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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