Return to main results Retrieve Phyre Job Id

Job DescriptionP30750
Confidence98.04%DateThu Jan 5 11:46:26 GMT 2012
Rank112Aligned Residues159
% Identity14%Templatec1szpC_
PDB info PDB header:dna binding proteinChain: C: PDB Molecule:dna repair protein rad51; PDBTitle: a crystal structure of the rad51 filament
Resolution3.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60.........70.........80.........90.........100.......
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  VPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPL
Query Conservation 
  

   
 
 








  
 
      
 
   
                 
  
 
   
    

        
Alig confidence 
























................






































Template Conservation 
  
 
  
 
 

 


 
   

................   
           
     
      

         
Template Sequence  VETGSITELFGEFRTGKSQLCHTLA. . . . . . . . . . . . . . . . VTCQIPLDIGGGEGKCLYIDTEGTFRPVRLVSIAQRFGL
Template Known Secondary structure  SSSSTTSS................TTS
TTTT

SSSSS


GGGGT

Template Predicted Secondary structure 









................

















Template SS confidence 















































































   175....180.........190......... 200.........210.........220.........230........
 
   108.110.........120.........130.........140.........150.........160.........170...... ...180..
Predicted Secondary structure 



































.....
Query SS confidence 




































































. . . . .





Query Sequence  ELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATT. . . . . RSILEL
Query Conservation                   
    
          




 


 

 

   
 







  

    .....  
   
Alig confidence 
































................



















.....





Template Conservation          
              
  
      ................    






  
      
          
Template Sequence  DPDDALNNVAYARAYNADHQLRLLDAAAQMMSE. . . . . . . . . . . . . . . . SRFSLIVVDSVMALYRELSARQMHLAKFMRA
Template Known Secondary structure 
GGG

STTT................S

TTGGG

T
Template Predicted Secondary structure 









................










Template SS confidence 















































































   239240.........250.........260.........270. ........280.........290.........300..
 
   183......190......... 200.........210........
Predicted Secondary structure 




.




Query SS confidence 
















.


















Query Sequence  LKDINRRLGLTILLITH. EMDVVKRICDCVAVISNGE
Query Conservation 
  
    
 


 


.       
 
 
 

  
 
Alig confidence 
















.


















Template Conservation 

 

    
 

  

 
          

 
    
Template Sequence  LQRLADQFGVAVVVTNQVGGNIMAHSSTTRLGFKKGK
Template Known Secondary structure 





S

S
Template Predicted Secondary structure 










Template SS confidence 




































   310.........320.........330.........340......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions