Job Description P30750 Confidence 100.00% Date Thu Jan 5 11:46:26 GMT 2012 Rank 5 Aligned Residues 309 % Identity 24% Template c1q1bD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:maltose/maltodextrin transport atp-binding protein malk; PDBTitle: crystal structure of e. coli malk in the nucleotide-free form Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	L	S	N	I	T	K	V	F	H	Q	G	T	R	T	I	Q	A	L	N	N	V	S	L	H	V	P	A	G	Q	I	Y	G	V	I	G	A	S	G	A	G	K	S	T	L	I	R	C	V	N	L	L	E	R	P	T	E	G	S	V	L	V	D	G	Q	E	L	T	T	L	S	E	S	E	L	T	K	A	R
Query Conservation
Alig confidence															.	.	.	.																																																													.	.	.
Template Conservation															.	.	.	.																																																													.	.	.
Template Sequence		V	Q	L	Q	N	V	T	K	A	W	G	E	V	.	.	.	.	V	V	S	K	D	I	N	L	D	I	H	E	G	E	F	V	V	F	V	G	P	S	G	C	G	K	S	T	L	L	R	M	I	A	G	L	E	T	I	T	S	G	D	L	F	I	G	E	K	R	M	N	D	T	P	P	A	E	R	G	.	.	.
Template Known Secondary structure												T	T		.	.	.	.												T	T								S	G	G	G	S								T	T	T	S	S				S	S					T	T				T	T			S	S	T	T		.	.	.
Template Predicted Secondary structure															.	.	.	.																																																													.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.					.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	I	G	M	I	F	Q	H	F	N	L	L	S	S	R	T	V	F	G	N	V	A	L	P	L	E	L	D	N	T	P	K	D	E	V	K	R	R	V	T	E	L	L	S	L	V	G	L	G	D	K	H	D	S	Y	P	S	N	L	S	G	G	Q	K	Q	R	V	A	I	A	R	A	L	A	S	N	P	K	V
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	V	G	M	V	F	Q	S	Y	A	L	Y	P	H	L	S	V	A	E	N	M	S	F	G	L	K	L	A	G	A	K	K	E	V	I	N	Q	R	V	N	Q	V	A	E	V	L	Q	L	A	H	L	L	D	R	K	P	K	A	L	S	G	G	Q	R	Q	R	V	A	I	G	R	T	L	V	A	E	P	S	V
Template Known Secondary structure		.	.				B		S						T	T	S						T	T	T	T	T	T	S	S	S	S	T	T	T	T	T	T	T					T	T	G	G	G	T		T	T		S	S					G	G	G	T	T	T	S	S	S	S	T	T					T	T			S
Template Predicted Secondary structure		.	.
Template SS confidence
				77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	C	D	E	A	T	S	A	L	D	P	A	T	T	R	S	I	L	E	L	L	K	D	I	N	R	R	L	G	L	T	I	L	L	I	T	H	E	M	D	V	V	K	R	I	C	D	C	V	A	V	I	S	N	G	E	L	I	E	Q	D	T	V	S	E	V	F	S	H	P	K	T	P	L	A	Q	K	F	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	L	D	E	P	L	S	N	L	D	A	A	L	R	V	Q	M	R	I	E	I	S	R	L	H	K	R	L	G	R	T	M	I	Y	V	T	H	D	Q	V	E	A	M	T	L	A	D	K	I	V	V	L	D	A	G	R	V	A	Q	V	G	K	P	L	E	L	Y	H	Y	P	A	D	R	F	V	A	G	F	I
Template Known Secondary structure				B	S	S	T	T	T	T			T	T	T															T	T								S										S							T	T														S		S	B							S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	T	L	H	L	D	I	P	E	D	Y	Q	E	R	L	Q	A	E	P	F	T	D	C	V	P	M	L	R	L	E	F	T	G	Q	S	V	D	A	P	L	L	S	E	T	A	R	R	F	N	V	N	N	N	I	I	S	A	Q	M	D	Y	A	G	G	V	K	F	G	I	M	L	T	E	M	H	G	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	P	K	M	N	F	L	P	V	K	V	T	A	T	A	I	D	Q	V	Q	V	E	L	P	M	P	N	R	Q	Q	V	W	L	P	V	E	S	R	D	V	Q	V	G	A	N	M	S	L	G	I	R	P	E	H	L	L	P	S	D	I	A	D	V	I	L	E	G	E	V	Q	V	V	E	Q	L	G	N
Template Known Secondary structure		S	S	S														T	T							S	S	T	T								B			T	T			T	T									G	G	G		B		S		S		S	S													S	S
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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