|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | I | V | V | L | I | S | G | N | G | S | N | L | Q | A | I | I | D | A | C | K | T | N | K | I | K | G | T | V | R | A | V | F | S | N | K | A | D | A | F | G | L | E | R | A | R | Q | A | G | I | A | T | H | T | L | I | A | S | A | F | D | S | R | E | A | Y | D | R | E | L | I | H | E | I | D | M | Y | A | P | D |
Query Conservation |   |
|
|
|
|   |   |
|
|   |
|
|   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|
|   |
|
|   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
Template Sequence |   |
R | V | A | V | L | I | S | G | T | G | S | N | L | Q | A | L | I | D | S | T | R | E | P | N | S | S | A | Q | I | D | I | V | I | S | N | K | A | A | V | A | G | L | D | K | A | E | R | A | G | I | P | T | R | V | I | N | H | K | L | Y | K | N | R | V | E | F | D | S | A | I | D | L | V | L | E | E | F | S | I | D |
Template Known Secondary structure |   |
 |  |  |  |  |  | S | S | S |
| T | T |  |  |  |  |  |  |  |  |  | S | T | T |
| S |
|  |  |  |  |  |  |  | S | S | T | T |
|  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
|
| G | G | G | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | V | V | L | A | G | F | M | R | I | L | S | P | A | F | V | S | H | Y | A | G | R | L | L | N | I | H | P | S | L | L | P | K | Y | P | G | L | H | T | H | R | Q | A | L | E | N | G | D | E | E | H | G | T | S | V | H | F | V | T | D | E | L | D | G | G | P | V | I | L | Q | A | K | V | P | V | F | A | G | D | S |
Query Conservation |   |
|
|
|   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|   |   |
|
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |
|   |
|
|
|   |
|   |   |   |   |
|   |
|   |
|
|   |
|   |   |   |   |
|   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |
|   |
|
|
|   |
|   | . | . | . |
|   |
|   |
|
|   |
|   |   |   |   |
|   |   |   |
|
|
Template Sequence |   |
I | V | C | L | A | G | F | M | R | I | L | S | G | P | F | V | Q | K | W | N | G | K | M | L | N | I | H | P | S | L | L | P | S | F | K | G | S | N | A | H | E | Q | A | L | E | T | G | V | T | V | T | G | C | T | V | H | F | V | A | . |
. |
. |
E | A | G | Q | I | I | L | Q | E | A | V | P | V | K | R | G | D | T |
Template Known Secondary structure |   |
 |  |  |  |  | S |
|
| S |
|
|
|  |  |  |  |  |  | T | T | T | S |  |  |  |  |  | S | S | S | T | T | S | S |
| S | S |
|  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  |  |  |
|
| . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |
|
| T | T |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | |
|
|
. | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
  |
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | D | D | I | T | A | R | V | Q | T | Q | E | H | A | I | Y | P | L | V | I | S | W | F | A | D | G | R | L | K | M | H | E | N | A | A | W | L | D | G | Q | R |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |
|   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | A | T | L | S | E | R | V | K | L | A | E | H | K | I | F | P | A | A | L | Q | L | V | A | S | G | T | V | Q | L | G | E | N | G | K | I | C | W | V | K | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |  |
| T | T | S | S |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
  |