 |
Job Description | P08179 | Confidence | 49.82% | Date | Thu Jan 5 11:00:44 GMT 2012 |
Rank | 124 | Aligned Residues | 99 |
% Identity | 13% | Template | d1ekxa2 |
SCOP info | ATC-like
| Aspartate/ornithine carbamoyltransferase
| Aspartate/ornithine carbamoyltransferase
|
Resolution | 1.95 |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | |
. | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | N | I | V | V | L | I | S | G | N | . |
G | S | N | L | Q | A | I | I | D | A | C | K | T | N | . |
K | I | K | G | T | V | R | A | V | F | S | N | K | A | D | A | F | G | L | E | R | A | R | Q | A | G | I | A | T | H | T | L | I | A | S | A | F | D | S | R | E | A | Y | D | R | E | L | I | H | E | I | D | M | Y |
Query Conservation |   |
|
|
|
|
|   |   |
|
|   | . |
|
|   |
|   |
|
|
|   |   |   |   |   |   | . |   |   |   |   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
Template Conservation |   |
|   |
|   |   |
|
|
|   |   |   |   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
Template Sequence |   |
L | H | V | A | M | V | G | D | L | K | Y | G | R | T | V | H | S | L | T | Q | A | L | A | K | F | D | G | N | R | F | Y | F | I | A | P | D | A | L | A | M | P | Q | Y | I | L | D | M | L | D | E | K | G | I | A | W | S | L | H | S | S | I | E | E | V | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A |
Template Known Secondary structure |   |
|  |  |  |  |  | S |
| T | T | T |
|  |  |  |  |  |  |  |  |  |  | T | T | S | S | S |
|  |  |  |  |  |
|
| G | G | G |
|
|
|  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
| S |
| S | T | T | T | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | G |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
155 | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
220 |
  |
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | P | D | V | V | V | L | A | G | F | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | I | L | S | P | A | F | V | S | H | Y | A | G | R | L | L | N | I | H | P | S | L | L | P | K | Y | P | G |
Query Conservation |   |
  |   |
|
|
|
|   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
Template Conservation |   |
  |
|
|
|
|
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |
|   |   |   |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
Template Sequence |   |
E | V | D | I | L | Y | M | T | R | V | Q | K | E | R | L | D | P | S | E | Y | A | N | V | K | A | Q | F | V | L | R | A | S | D | L | H | N | A | K | A | N | M | K | V | L | H | P | L | P | . |
. |
. |
. |
R | V |
Template Known Secondary structure |   |
G |
| S |  |  |  |  |
|
|
|
| G | G | G |
|
| G | G | G | G | G | G |
| S |
| S |
|
| B |
| G | G | G | G | T | T |
|
| T | T |
|  |  |  |
|
| S |
| . | . | . | . |
| S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
| . | . | . | . |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
221 | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | |
|
|
|
. | 270 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|