Return to main results Retrieve Phyre Job Id

Job DescriptionP08179
Confidence100.00%DateThu Jan 5 11:00:44 GMT 2012
Rank20Aligned Residues195
% Identity19%Templatec3rfoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:methionyl-trna formyltransferase; PDBTitle: crystal structure of methyionyl-trna formyltransferase from bacillus2 anthracis
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.. .......20.........30......... 40.........50.........60........
Predicted Secondary structure 





..









..........













Query SS confidence 











. .


























. . . . . . . . . .




























Query Sequence  MNIVVLISGNGS. . NLQAIIDACKTNKIKGTVRAVFSNKAD. . . . . . . . . . AFGLERARQAGIATHTLIASAFDSREAYD
Query Conservation 




  

 

.. 
 


           
  


    ..........      
   


                
Alig confidence 











..









......










..........














.......






Template Conservation 




 

   
   
  
     ...... 
  


 
     
        
   
    


 .......       
Template Sequence  IKVVFXGTPDFSVPVLRRLIEDGY. . . . . . DVIGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIPVL. . . . . . . QPLRIRE
Template Known Secondary structure  S

STTTT
......




TTTT


TT

.......

S
TTS
Template Predicted Secondary structure 






......



















.......





Template SS confidence 















































































   2.......10.........20..... ....30.........40.........50.........60. .......
 
   6970.........80.........90.........100.........110.........120.........130.........140........
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  RELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPV
Query Conservation        
     



  
   

    
       

 





  

  
   

  
    
 


 
    
 
 
Alig confidence 















































































Template Conservation        
     

 
      


  

     
 








 


  

 


  
    




      
 
 
Template Sequence  KDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAPIHYAIXEGKEKTGITIXYXVEKLDAGDI
Template Known Secondary structure 

SSS

S


SSTT
SS
TTSSBSS
TT
S

SSTT
S
Template Predicted Secondary structure 






































Template SS confidence 















































































   6970.........80.........90.........100.........110.........120.........130.........140........
 
   149150.........160.........170.........180......... 190.........200........
Predicted Secondary structure 








...







Query SS confidence 








































. . .


















Query Sequence  ILQAKVPVFAGDSEDDITARVQTQEHAIYPLVISWFADGRL. . . KMHENAAWLDGQRLPPQGY
Query Conservation 
 
    
   

   
  
       
    
  
  
 
...            
      
Alig confidence 








































...


















Template Conservation 
 
    
   

   
   
      

   
  
         
      
  
    
  
Template Sequence  LTQVEVEIEERETTGSLFDKLSEAGAHLLSKTVPLLIQGKLEPIKQNEEEVTFAYNIKREQEK
Template Known Secondary structure 

TT

TT



B


GGG

B




B
Template Predicted Secondary structure 























Template SS confidence 






























































   149150.........160.........170.........180.........190.........200.........210.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions