Return to main results Retrieve Phyre Job Id

Job DescriptionP08179
Confidence100.00%DateThu Jan 5 11:00:44 GMT 2012
Rank5Aligned Residues195
% Identity26%Templatec3o1lB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:formyltetrahydrofolate deformylase; PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (pspto_4314)2 from pseudomonas syringae pv. tomato str. dc3000 at 2.20 a resolution
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  NIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAPD
Query Conservation 



  

 

 
 


           
  


          
   


                      
     
Alig confidence 







































..

















.


















Template Conservation 







 
  
  

     
 
  

  



     ..  
    

   
     . 
   
      
     
Template Sequence  RVVLXASRESHCLADLLHRWHSDELDCDIACVISNHQDLR. . SXVEWHDIPYYHVPVDPK. DKEPAFAEVSRLVGHHQAD
Template Known Secondary structure 
S

TT
S
SSSSTT..TT




BTT.B
TT
S
Template Predicted Secondary structure 













..







.




Template SS confidence 















































































   88.90.........100.........110.........120....... ..130.........140..... ....150.........160....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  VVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGDS
Query Conservation 


  
   

    
       

 





  

  
   

  
    
 


 
    
 
 

 
    
   

Alig confidence 















































































Template Conservation 




 

 

    
      









   
      
   
 
  
 


 
    
 



 
  
 
   

Template Sequence  VVVLARYXQILPPQLCREYAHQVINIHHSFLPSFVGAKPYHQASLRGVKLIGATCHYVTEELDAGPIIEQDVVRVSHRDS
Template Known Secondary structure  SS

S


TTTTT
SS
TTSS
SS
T
S

SSTT
S


TT

Template Predicted Secondary structure 




































Template SS confidence 















































































   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   162.......170.........180.........190.........
Predicted Secondary structure 




Query SS confidence 





































Query Sequence  EDDITARVQTQEHAIYPLVISWFADGRLKMHENAAWLD
Query Conservation     
  
       
    
  
  
 
          
Alig confidence 





































Template Conservation     
       
   
  

    
 

 
   
 


Template Sequence  IENXVRFGRDVEKXVLARGLRAHLEDRVLVHDNKTVVF
Template Known Secondary structure  TT
TT
Template Predicted Secondary structure 




Template SS confidence 





































   245....250.........260.........270.........280..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions