Job Description P08179 Confidence 78.25% Date Thu Jan 5 11:00:44 GMT 2012 Rank 67 Aligned Residues 78 % Identity 13% Template c3nbmA_ PDB info PDB header:transferase Chain: A: PDB Molecule:pts system, lactose-specific iibc components; PDBTitle: the lactose-specific iib component domain structure of the2 phosphoenolpyruvate:carbohydrate phosphotransferase system (pts) from3 streptococcus pneumoniae. Resolution 1.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	I	V	V	L	I	S	G	N	G	S	N	.	.	.	L	Q	A	I	I	D	A	C	K	T	N	K	I	K	G	T	V	R	A	V	F	S	N	K	A	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	L	E	R	A	R	Q	A	G	I	A	T	H	T	L	I	A
Query Conservation															.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	V	L	V	L	C	A	G	S	G	T	S	A	Q	L	A	N	A	I	N	E	G	A	N	L	T	E	V	R	V	I	A	N	S	G	A	Y	G	A	H	Y	D	I	X	G	V	Y	D	L	I	I	L	A	P	Q	V	R	S	Y	Y	R	E	X	K	V	D	A	E	R	L	G	I	Q	I	V	A	T	R	G
Template Known Secondary structure									S	S	S	S																	T		S								T	T	S		T	T	T	G	G	G		S						G	G	G	G	G	G									T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	F	D	S	R	E	A	Y	D	R	E	L	I	H	E	I	D	M	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	E	Y	I	H	L	T	K	S	P	S	K	A	L	Q	F	V	L	E	H
Template Known Secondary structure									T												T
Template Predicted Secondary structure
Template SS confidence
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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