Job Description P08179 Confidence 77.81% Date Thu Jan 5 11:00:44 GMT 2012 Rank 68 Aligned Residues 96 % Identity 15% Template c3ketA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:redox-sensing transcriptional repressor rex; PDBTitle: crystal structure of a rex-family transcriptional regulatory protein2 from streptococcus agalactiae bound to a palindromic operator Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	V	V	L	I	S	G	N	G	S	N	L	Q	A	I	I	D	A	C	K	T	N	K	I	K	G	T	V	R	A	V	F	S	N	K	A	D	A	F	G	L	E	R	A	R	Q	A	G	I	A	T	H	T	L	I	A	S	A	F	D	S	R	E	A	Y	D	R	E	L	I	H	E	I	D	M	Y	A	P	D
Query Conservation
Alig confidence							.	.																																			.														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.																																			.														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	V	M	L	V	.	.	G	C	G	N	I	G	R	A	L	L	H	Y	R	F	H	D	R	N	K	M	Q	I	S	M	A	F	D	L	D	S	N	D	L	V	.	G	K	T	T	E	D	G	I	P	V	Y	G	I	.	.	.	.	.	.	.	.	.	.	.	.	S	T	I	N	D	H	L	I	D	S	D	I	E
Template Known Secondary structure							.	.			S								T	S		G	G	G	T	S	S										T	T	S	T	T	T	.	T	S	B		T	T	S		B				G	.	.	.	.	.	.	.	.	.	.	.	.	G	G					T	S	S	S
Template Predicted Secondary structure							.	.																																			.														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.													.	.	140	.	.	.	.	.	.	.	.	.	150
		82	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure								.	.	.
Query SS confidence								.	.	.
Query Sequence		V	V	V	L	A	G	.	.	.	F	M	R	I	L	S	P	A	F	V	S	H	Y	A	G	R	L	L	N	I	H	P	S	L	L
Query Conservation								.	.	.
Alig confidence								.	.	.
Template Conservation
Template Sequence		T	A	I	L	T	V	P	S	T	E	A	Q	E	V	A	D	I	L	V	K	A	G	I	K	G	I	L	S	F	S	P	V	H	L
Template Known Secondary structure							S		G	G	G											T	T								S	S	S
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions