Job Description P08179 Confidence 49.23% Date Thu Jan 5 11:00:44 GMT 2012 Rank 127 Aligned Residues 84 % Identity 15% Template c3bioB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:oxidoreductase, gfo/idh/moca family; PDBTitle: crystal structure of oxidoreductase (gfo/idh/moca family member) from2 porphyromonas gingivalis w83 Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																												.	.	.	.	.	.	.	.	.	50	.	.
Predicted Secondary structure												.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	I	V	V	L	I	S	G	N	.	G	S	N	L	Q	A	I	I	D	A	C	K	T	N	K	I	K	G	T	V	R	A	V	F	S	N	K	A	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	L	E	R	A	R	Q	A	G	I	A
Query Conservation												.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.													.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.
Template Sequence		I	R	A	A	I	V	G	Y	G	N	I	G	R	Y	A	L	Q	A	L	R	E	A	P	.	.	.	.	D	F	E	I	A	G	I	V	R	R	N	P	A	Q	P	F	R	V	V	S	D	I	E	Q	L	E	S	V	D	V	A	L	V	C	S	P	S	R	E	V	E	R	T	A	L	E	I	L	K	K	G	I	C
Template Known Secondary structure										S														T	.	.	.	.	T									S	S					S				S	S	G	G	G	S	S	S								S															T	T
Template Predicted Secondary structure																									.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	T	L	I	A	S	A	F	D	S	R	E	A	Y	D	R	E	L	I	H	E	I	D	M	Y	A	P	D	V	V	V	L	A	G	F	M
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		T	A	.	D	S	F	D	I	H	D	G	I	L	A	L	R	R	S	L	G	D	A	A	G	K	S	G	A	A	A	V	I	A	S	G	W	D
Template Known Secondary structure				.						G	G	G																T						S		B	B	T
Template Predicted Secondary structure				.
Template SS confidence
		89	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions