|   |
3 | . | . | . | . | |
. | . | 10 | . | |
|
. | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
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. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
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|
Predicted Secondary structure |   |
 |  |  |  |  | . |
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|
| . | . |
|
|  |  |  |  |  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |
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|
|  |  |  |  | . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
| . |
|
|
|
| . |
. |
|
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|
| . |
. |
. |
. |
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|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
I | V | V | L | I | . |
S | G | N | G | . |
. |
S | N | L | Q | A | I | I | D | A | C | K | T | N | K | I | K | G | T | V | R | A | V | F | S | N | K | A | D | A | F | G | L | E | . |
. |
. |
. |
R | A | R | Q | A | G | I | A | T | H | T | L | I | A | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
|
|
|   |   | . |
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|   |
| . | . |
|   |
|   |
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|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
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|
|   |   |   |   |   |   |   |   |   | . | . | . | . |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
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| . |
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| . | . |
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| . |
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| . | . | . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |
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|   |
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|   |
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|
|   |   |   |   |   |   |   | . |
|   |   |
|   |
|
|   |   |
|   |   |
|   |   |
|   |
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|
|   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|
Template Sequence |   |
I | V | L | F | G | S | T | G | A | G | K | T | T | T | L | A | K | L | A | A | I | S | M | L | E | K | . |
H | K | K | I | A | F | I | T | T | D | T | Y | R | I | A | A | V | E | Q | L | K | T | Y | A | E | L | L | Q | A | P | L | E | V | C | Y | T | K | E | E | F | Q | Q | A | K | E | L | F | S | E | Y | D | H | V |
Template Known Secondary structure |   |
|
|  |  |  |
| S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | . |
|
|
|  |  |  |  |  |  |
|
| S | S | T | T | T | T |  |  |  |  | T |  |  |  |  | T | T |
|
|  |  |  |
| S | S |  |  |  |  |  |  |  |  |  | T | T | T | T | S | S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  |  |  |
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|  |  |
Template SS confidence |   |
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  |   |
178 | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | |
. | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . |
  |
  |   |
|
|
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
|
|
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|
. | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
|
|
|
. | . | . | . | 120 | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
|
|
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|
|
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| . |
. |
. |
. |
. |
. |
. |
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| . |
. |
. |
. |
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Query Sequence |   |
. |
. |
A | F | D | S | R | E | A | Y | D | R | E | L | I | H | E | I | D | M | . |
. |
. |
. |
. |
. |
. |
Y | A | P | D | V | V | V | L | A | G | F | M | R | I | L | S | P | A | F | V | S | H | Y | A | G | R | L | L | N | I | H | P | S | L | L | P | K | Y | . |
. |
. |
. |
P | G | L | H | T | H | R | Q | A | L | E |
Query Conservation |   |
. | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   | . | . | . | . | . | . | . |   |   |   |
|
|
|
|   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|
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|
|   |   | . | . | . | . |
|
|   |   |
|   |   |   |
|
|   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
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| . | . |
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|
|
|
| . | . | . | . |
|
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|
|
|
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|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |
Template Sequence |   |
F | V | D | T | A | G | R | N | F | K | D | P | Q | Y | I | D | E | L | K | E | T | I | P | F | E | S | S | I | Q | S | F | L | V | L | S | A | T | A | K | Y | E | D | M | K | H | I | V | K | R | F | S | . |
. |
S | V | P | V | N | Q | Y | I | F | T | K | I | D | E | T | T | S | L | G | S | V | F | N | I | L | A | E |
Template Known Secondary structure |   |
 |  |  |  |
|
|
|
|
| S | S | G | G | G | T |  |  |  |  |  |  | S |
|
|
| T | T | B |
|
|  |  |  |  |  | T | T | S |
|  |  |  |  | T | T | T | T | T | T | S | S | . | . | S | S |
|
|
|
|
|  |  |  |
| T | T | T |
| S |
|
|  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
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|
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|
|
  |   |
257 | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | |
|
. | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . |
  |
  |   |
127 | . | . | 130 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | G | D | E | E | H | G | T | S |
Query Conservation |   |
  |
|   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |   |   |
Template Sequence |   |
S | K | I | G | V | G | F | M | T |
Template Known Secondary structure |   |
| S | S |
|
|
|  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
335 | . | . | . | . | 340 | . | . | . |
  |