Job Description P08179 Confidence 38.47% Date Thu Jan 5 11:00:44 GMT 2012
Rank 163 Aligned Residues 125
% Identity 14% Template c2ph5A_
PDB info
PDB header: transferaseChain: A: PDB Molecule: homospermidine synthase;
PDBTitle: crystal structure of the homospermidine synthase hss from legionella2 pneumophila in complex with nad, northeast structural genomics target3 lgr54
Resolution 2.50 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
2 . . . . . . . 10
. . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
N I V V L I S G N .
G S N L Q A I I D A C K T N K I K G T V R A V F S N K A D A F G L E R A R Q A G I A T H T L I A S A F D S R E A Y D R E L I H E I D M Y A P
Query Conservation  
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Alig confidence  
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Template Conservation  
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Template Sequence  
R F V I L G F G C V G Q A L X P L I F E K F .
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D I K P S Q V T I I A A E G T K V D V A Q Q Y G V S F K L Q Q I T P .
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Q N Y L E V I G S T L E .
E N
Template Known Secondary structure  
S B . . . . G G G S S S T T . . . . . T T T G G G . T T
Template Predicted Secondary structure  
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Template SS confidence  
   
15 . . . . 20 . . . . . . . . . 30 . . . . . .
. . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70
. . . . . . . . . 80 . .
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81 . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110
. . . . . . . . . 120 . . . . . . . . . 130 . . . . . .
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
D V V V L A G F M R I L S P A F V S H Y A G R L L N I H P S .
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L L P K Y P G L H T H R Q A L E N G D E E H G T S V
Query Conservation  
                                  . .                            
Alig confidence  
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Template Conservation  
                                     
Template Sequence  
D F L I D V S I G I S S L A L I I L C N Q K G A L Y I N A A T E P W K E R R T N Y S L R E E V L R L K D K T Q K T A
Template Known Secondary structure  
S S S T S S T T T T T S
Template Predicted Secondary structure  
Template SS confidence  
   
85 . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140 . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]