Job Description P08179 Confidence 90.58% Date Thu Jan 5 11:00:44 GMT 2012 Rank 39 Aligned Residues 71 % Identity 14% Template c2nvwB_ PDB info PDB header:transcription Chain: B: PDB Molecule:galactose/lactose metabolism regulatory protein PDBTitle: crystal sctucture of transcriptional regulator gal80p from2 kluyveromymes lactis Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure												.	.																																											.	.	.
Query SS confidence												.	.																																											.	.	.
Query Sequence		M	N	I	V	V	L	I	S	G	N	.	.	G	S	N	L	Q	A	I	I	D	A	C	K	T	N	K	I	K	G	T	V	R	A	V	F	S	N	K	A	D	A	F	G	L	E	R	A	R	Q	A	G	I	A	.	.	.	T	H	T	L	I	A	S	A	F	D	S	R	E	A	Y	D	R	E	L	I	H	E	I
Query Conservation												.	.																																											.	.	.
Alig confidence												.	.																										.																	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	R	V	G	F	V	G	L	T	S	G	K	S	W	V	A	K	T	H	F	L	A	I	Q	Q	L	S	S	Q	F	Q	I	V	A	L	Y	N	.	P	T	L	K	S	S	L	Q	T	I	E	Q	L	Q	L	K	H	A	T	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	L	E	S	F	A
Template Known Secondary structure								S			S	T	T	S					T								T	T	T	T									.	S	S											T	T		T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																							.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.															.	.	.	.	80	.	.
		76	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	Y	A	P	D	V	V	V	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	Y	K	D	I	D	M	I	V	V	S
Template Known Secondary structure				T	T		S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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