Job Description P08179 Confidence 56.62% Date Thu Jan 5 11:00:44 GMT 2012 Rank 107 Aligned Residues 87 % Identity 20% Template c2hmaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable trna (5-methylaminomethyl-2-thiouridylate)- PDBTitle: the crystal structure of trna (5-methylaminomethyl-2-thiouridylate)-2 methyltransferase trmu from streptococcus pneumoniae Resolution 2.41 Å

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		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.											.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure											.																																.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Query SS confidence											.																																.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Query Sequence		N	I	V	V	L	I	S	G	N	.	G	S	N	L	Q	A	I	I	D	A	C	K	T	N	K	I	K	G	T	V	R	A	V	F	S	N	K	A	D	A	F	.	.	.	.	.	.	.	.	.	.	G	L	E	R	A	R	Q	A	G	I	A	T	H	T	L	I	A	S	A	F	D	S	.	.	.	.	.	.	.
Query Conservation											.																																.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Alig confidence											.													.	.	.	.																.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Template Conservation																								.	.	.	.
Template Sequence		R	V	V	V	G	X	S	G	G	V	D	S	S	V	T	A	L	L	L	K	E	Q	.	.	.	.	G	Y	D	V	I	G	I	F	X	K	N	W	D	D	T	D	C	T	A	T	E	D	Y	K	D	V	V	A	V	A	D	Q	I	G	I	P	Y	Y	S	V	N	F	E	K	E	Y	W	D	R	V	F	E	Y	F
Template Known Secondary structure									S	S													T	.	.	.	.	T																																	T																T
Template Predicted Secondary structure																								.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
																			64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	A	Y	D	R	E	L	I	H	E	I	D	M	Y	A	P	D	V	V	V	L	A	G	F	M	R	I	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	E	Y	R	A	G	R	T	P	N	P	D	V	X	C	N	K	E	I	K	F	K	A	F	L	D	Y	A	I	T	L	G	A	D	Y	V	A	T	G	H	Y	A	R	V	A
Template Known Secondary structure							T	T													T	T	T	T								T	T	T		S							S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions