Job Description P08179 Confidence 55.44% Date Thu Jan 5 11:00:44 GMT 2012 Rank 110 Aligned Residues 92 % Identity 16% Template c2dt5A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:at-rich dna-binding protein; PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8 Resolution 2.16 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	V	V	L	I	S	G	N	G	S	N	L	Q	A	I	I	D	A	C	K	T	N	K	I	K	G	T	V	R	A	V	F	S	N	K	A	D	A	F	G	L	E	R	A	R	Q	A	G	I	A	T	H	T	L	I	A	S	A	F	D	S	R	E	A	Y	D	R	E	L	I	H	E	I	D	M	Y	A	P	D
Query Conservation
Alig confidence							.	.																		.																	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.																		.																	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	C	I	V	.	.	G	M	G	R	L	G	S	A	L	A	D	Y	P	G	F	G	E	.	S	F	E	L	R	G	F	F	D	V	D	P	E	K	V	G	.	.	.	R	P	V	R	G	G	V	I	E	H	V	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	Q	R	V	P	G	R	I	E
Template Known Secondary structure							.	.			S										S				S	.	S									S		T	T	T	T	T	.	.	.				T	T						G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.					S	T	T	T
Template Predicted Secondary structure							.	.																		.																	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.														.	.	.	.	.	.	.	140	.	.
		82	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence		V	V	V	L	A	.	.	.	G	F	M	R	I	L	S	P	A	F	V	S	H	Y	A	G	R	L	L	N	I	H	P	S	L	L
Query Conservation							.	.	.
Alig confidence							.	.	.
Template Conservation
Template Sequence		I	A	L	L	T	V	P	R	E	A	A	Q	K	A	A	D	L	L	V	A	A	G	I	K	G	I	L	N	F	A	P	V	V	L
Template Known Secondary structure							S																T								S	S	S
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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